Difference between revisions of "SJ08500"

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(Created page with "Category:gene == Gene SJ07699 == * transcription-direction: ** positive * right-end-position: ** 36626 * left-end-position: ** 30440 * centisome-position: ** 48.318993...")
(Created page with "Category:gene == Gene SJ08500 == * transcription-direction: ** negative * right-end-position: ** 39447 * left-end-position: ** 32222 * centisome-position: ** 7.3477635...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ07699 ==
+
== Gene SJ08500 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 36626
+
** 39447
 
* left-end-position:
 
* left-end-position:
−
** 30440
+
** 32222
 
* centisome-position:
 
* centisome-position:
−
** 48.318993    
+
** 7.3477635    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[QUERCETIN-3-O-METHYLTRANSFERASE-RXN]]
+
* [[PEROXID-RXN]]
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-1104]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-1143]]
+
* [[RXN-14240]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-13935]]
+
* [[RXN-15288]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-3422]]
+
* [[RXN-17352]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-8635]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6064]]
+
* [[PWY-7214]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-7161]]
+
* [[PWY-7445]]
−
** '''1''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-2181]]
+
* [[PWY-5466]]
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7498]]
 
 
** '''2''' reactions found over '''10''' reactions in the full pathway
 
** '''2''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY-7186]]
+
* [[PWY-6824]]
−
** '''2''' reactions found over '''12''' reactions in the full pathway
+
** '''2''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY-1121]]
+
* [[PWY-5469]]
−
** '''9''' reactions found over '''19''' reactions in the full pathway
+
** '''2''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-361]]
+
* [[PWY-5461]]
−
** '''7''' reactions found over '''15''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY-5168]]
+
{{#set: transcription-direction=negative}}
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
{{#set: right-end-position=39447}}
−
* [[PWY-7163]]
+
{{#set: left-end-position=32222}}
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
{{#set: centisome-position=7.3477635   }}
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=36626}}
 
−
{{#set: left-end-position=30440}}
 
−
{{#set: centisome-position=48.318993   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=5}}
 
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=9}}
+
{{#set: nb pathway associated=6}}

Latest revision as of 11:09, 18 March 2021

Gene SJ08500

  • transcription-direction:
    • negative
  • right-end-position:
    • 39447
  • left-end-position:
    • 32222
  • centisome-position:
    • 7.3477635

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7214
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7445
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5466
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-6824
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-5469
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-5461
    • 1 reactions found over 1 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ08500&oldid=136088"