Difference between revisions of "SJ13485"
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(Created page with "Category:gene == Gene SJ01234 == * transcription-direction: ** negative * right-end-position: ** 248214 * left-end-position: ** 236690 * centisome-position: ** 42.771072...") |
(Created page with "Category:gene == Gene SJ13485 == * transcription-direction: ** negative * right-end-position: ** 119369 * left-end-position: ** 102412 * centisome-position: ** 30.516636...") |
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[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ13485 == |
* transcription-direction: | * transcription-direction: | ||
** negative | ** negative | ||
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 119369 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 102412 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 30.516636 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
+ | * [[RXN-12587]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-12588]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-14382]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-14384]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-14385]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-14386]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-15881]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-9787]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * | + | * [[RXN0-308]] |
− | |||
− | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[RXN | + | * [[SELENOCYSTEINE-LYASE-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | + | </div> | |
− | |||
− | |||
== Pathway(s) associated == | == Pathway(s) associated == | ||
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
− | * [[PWY- | + | * [[PWY-6892]] |
− | ** ''' | + | ** '''5''' reactions found over '''7''' reactions in the full pathway |
− | * [[PWY- | + | * [[PWY-7250]] |
+ | ** '''5''' reactions found over '''10''' reactions in the full pathway | ||
+ | * [[PWY0-1021]] | ||
+ | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
+ | * [[PWY-7892]] | ||
+ | ** '''3''' reactions found over '''11''' reactions in the full pathway | ||
+ | * [[PWY-6891]] | ||
+ | ** '''4''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[PWY-7904]] | ||
+ | ** '''1''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-7891]] | ||
** '''1''' reactions found over '''4''' reactions in the full pathway | ** '''1''' reactions found over '''4''' reactions in the full pathway | ||
− | * [[PWY- | + | * [[PWY-7889]] |
− | ** ''' | + | ** '''2''' reactions found over '''4''' reactions in the full pathway |
− | + | * [[PWY-7888]] | |
− | + | ** '''2''' reactions found over '''7''' reactions in the full pathway | |
− | * [[PWY- | + | * [[PWY-6823]] |
− | + | ** '''7''' reactions found over '''6''' reactions in the full pathway | |
− | |||
− | |||
− | |||
− | ** | ||
− | |||
− | |||
− | * [[PWY- | ||
− | ** ''' | ||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
</div> | </div> | ||
{{#set: transcription-direction=negative}} | {{#set: transcription-direction=negative}} | ||
− | {{#set: right-end-position= | + | {{#set: right-end-position=119369}} |
− | {{#set: left-end-position= | + | {{#set: left-end-position=102412}} |
− | {{#set: centisome-position= | + | {{#set: centisome-position=30.516636 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=10}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=10}} |
Latest revision as of 11:07, 18 March 2021
Contents
Gene SJ13485
- transcription-direction:
- negative
- right-end-position:
- 119369
- left-end-position:
- 102412
- centisome-position:
- 30.516636
Organism(s) associated with this gene
Reaction(s) associated
- RXN-12587
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-12588
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-14382
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-14384
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-14385
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-14386
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-15881
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-9787
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN0-308
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- SELENOCYSTEINE-LYASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-6892
- 5 reactions found over 7 reactions in the full pathway
- PWY-7250
- 5 reactions found over 10 reactions in the full pathway
- PWY0-1021
- 1 reactions found over 1 reactions in the full pathway
- PWY-7892
- 3 reactions found over 11 reactions in the full pathway
- PWY-6891
- 4 reactions found over 7 reactions in the full pathway
- PWY-7904
- 1 reactions found over 5 reactions in the full pathway
- PWY-7891
- 1 reactions found over 4 reactions in the full pathway
- PWY-7889
- 2 reactions found over 4 reactions in the full pathway
- PWY-7888
- 2 reactions found over 7 reactions in the full pathway
- PWY-6823
- 7 reactions found over 6 reactions in the full pathway