Difference between revisions of "SJ22311"

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(Created page with "Category:gene == Gene SJ10377 == * transcription-direction: ** negative * right-end-position: ** 726933 * left-end-position: ** 709554 * centisome-position: ** 87.70407...")
(Created page with "Category:gene == Gene SJ22311 == * transcription-direction: ** negative * right-end-position: ** 177283 * left-end-position: ** 139255 * centisome-position: ** 78.09057...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ10377 ==
+
== Gene SJ22311 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 726933
+
** 177283
 
* left-end-position:
 
* left-end-position:
−
** 709554
+
** 139255
 
* centisome-position:
 
* centisome-position:
−
** 87.70407    
+
** 78.09057    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ARGSUCCINSYN-RXN]]
+
* [[RXN-13398]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-17252]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* [[RXN-7676]]
−
* [[RXN-10]]
+
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-7677]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-7740]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7400]]
+
* [[PWY-6927]]
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
** '''2''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-4984]]
+
* [[PWY-5098]]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''2''' reactions found over '''6''' reactions in the full pathway
−
* [[ARGSYN-PWY]]
+
* [[PWY-5068]]
−
** '''5''' reactions found over '''4''' reactions in the full pathway
+
** '''4''' reactions found over '''7''' reactions in the full pathway
−
* [[ARGSYNBSUB-PWY]]
 
−
** '''9''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-4983]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-5154]]
 
−
** '''8''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-5]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=726933}}
+
{{#set: right-end-position=177283}}
−
{{#set: left-end-position=709554}}
+
{{#set: left-end-position=139255}}
−
{{#set: centisome-position=87.70407   }}
+
{{#set: centisome-position=78.09057   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=3}}

Latest revision as of 11:08, 18 March 2021

Gene SJ22311

  • transcription-direction:
    • negative
  • right-end-position:
    • 177283
  • left-end-position:
    • 139255
  • centisome-position:
    • 78.09057

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6927
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-5098
    • 2 reactions found over 6 reactions in the full pathway
  • PWY-5068
    • 4 reactions found over 7 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ22311&oldid=135377"