Difference between revisions of "METHYLMALONYL-COA-DECARBOXYLASE-RXN"

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(Created page with "Category:reaction == Reaction PANTOATE-BETA-ALANINE-LIG-RXN == * direction: ** left-to-right * common-name: ** pantothenate synthetase * ec-number: ** [http://enzyme.expas...")
(Created page with "Category:reaction == Reaction METHYLMALONYL-COA-DECARBOXYLASE-RXN == * direction: ** reversible * common-name: ** (s)-methylmalonyl-coa decarboxylase * ec-number: ** [http...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction PANTOATE-BETA-ALANINE-LIG-RXN ==
+
== Reaction METHYLMALONYL-COA-DECARBOXYLASE-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** pantothenate synthetase
+
** (s)-methylmalonyl-coa decarboxylase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.3.2.1 ec-6.3.2.1]
+
** [http://enzyme.expasy.org/EC/4.1.1.41 ec-4.1.1.41]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[B-ALANINE]][c] '''+''' 1 [[L-PANTOATE]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PANTOTHENATE]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[D-METHYL-MALONYL-COA]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[PROPIONYL-COA]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ13797]]
+
* Gene: [[SJ14591]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PANTO-PWY]], phosphopantothenate biosynthesis I:
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR101656
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10913 10913]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21396 21396]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02473 R02473]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00923 R00923]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P31663 P31663]
+
** [http://www.uniprot.org/uniprot/Q57079 Q57079]
−
** [http://www.uniprot.org/uniprot/Q9PIK2 Q9PIK2]
+
** [http://www.uniprot.org/uniprot/Q56724 Q56724]
−
** [http://www.uniprot.org/uniprot/P56061 P56061]
+
** [http://www.uniprot.org/uniprot/Q57490 Q57490]
−
** [http://www.uniprot.org/uniprot/P57035 P57035]
+
** [http://www.uniprot.org/uniprot/Q57111 Q57111]
−
** [http://www.uniprot.org/uniprot/Q9ZN52 Q9ZN52]
+
** [http://www.uniprot.org/uniprot/Q57286 Q57286]
−
** [http://www.uniprot.org/uniprot/Q09673 Q09673]
+
** [http://www.uniprot.org/uniprot/O86517 O86517]
−
** [http://www.uniprot.org/uniprot/O24210 O24210]
+
** [http://www.uniprot.org/uniprot/O52601 O52601]
−
** [http://www.uniprot.org/uniprot/Q9X713 Q9X713]
+
** [http://www.uniprot.org/uniprot/O54028 O54028]
−
{{#set: direction=left-to-right}}
+
** [http://www.uniprot.org/uniprot/O54029 O54029]
−
{{#set: common-name=pantothenate synthetase}}
+
** [http://www.uniprot.org/uniprot/O54030 O54030]
−
{{#set: ec-number=ec-6.3.2.1}}
+
** [http://www.uniprot.org/uniprot/O54031 O54031]
 +
{{#set: direction=reversible}}
 +
{{#set: common-name=(s)-methylmalonyl-coa decarboxylase}}
 +
{{#set: ec-number=ec-4.1.1.41}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:19, 18 March 2021

Reaction METHYLMALONYL-COA-DECARBOXYLASE-RXN

  • direction:
    • reversible
  • common-name:
    • (s)-methylmalonyl-coa decarboxylase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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