Difference between revisions of "GTPPYPHOSKIN-RXN"
Jump to navigation
Jump to search
(Created page with "Category:reaction == Reaction RXN-9654 == * direction: ** left-to-right * common-name: ** fatty acid synthase * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3....") |
(Created page with "Category:reaction == Reaction GTPPYPHOSKIN-RXN == * direction: ** left-to-right * common-name: ** gtp pyrophosphokinase ** gtp diphosphokinase * ec-number: ** [http://enzy...") |
||
(4 intermediate revisions by 3 users not shown) | |||
Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction RXN | + | == Reaction GTPPYPHOSKIN-RXN == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
− | ** | + | ** gtp pyrophosphokinase |
+ | ** gtp diphosphokinase | ||
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/2. | + | ** [http://enzyme.expasy.org/EC/2.7.6.5 ec-2.7.6.5] |
− | |||
− | |||
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[ATP]][c] '''+''' 1 [[GTP]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[GDP-TP]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | + | * Gene: [[SJ10100]] | |
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | * Gene: [[ | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
− | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
− | *** Source: [[ | + | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
− | * Gene: [[ | + | * Gene: [[SJ07200]] |
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
− | * Gene: [[ | + | * Gene: [[SJ13961]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
− | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
− | *** Source: [[ | + | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
− | * Gene: [[ | + | * Gene: [[SJ14690]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
− | |||
− | |||
− | |||
− | |||
== Pathway(s) == | == Pathway(s) == | ||
− | * [[PWY | + | * [[PPGPPMET-PWY]], ppGpp metabolism: |
− | ** ''' | + | ** '''5''' reactions found over '''6''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
+ | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | |||
== External links == | == External links == | ||
+ | * METANETX-RXN : MNXR100457 | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22089 22089] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R00429 R00429] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/Q9CJ94 Q9CJ94] | ||
+ | ** [http://www.uniprot.org/uniprot/P44644 P44644] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PDR3 Q9PDR3] | ||
+ | ** [http://www.uniprot.org/uniprot/P0AG20 P0AG20] | ||
+ | ** [http://www.uniprot.org/uniprot/P52560 P52560] | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: common-name= | + | {{#set: common-name=gtp pyrophosphokinase|gtp diphosphokinase}} |
− | {{#set: ec-number=ec-2. | + | {{#set: ec-number=ec-2.7.6.5}} |
− | {{#set: nb gene associated= | + | {{#set: nb gene associated=4}} |
{{#set: nb pathway associated=1}} | {{#set: nb pathway associated=1}} | ||
− | {{#set: reconstruction category=annotation | + | {{#set: reconstruction category=orthology|annotation}} |
{{#set: reconstruction tool=pathwaytools|pantograph}} | {{#set: reconstruction tool=pathwaytools|pantograph}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=saccharina_japonica_genome | + | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}} |
Latest revision as of 11:19, 18 March 2021
Contents
Reaction GTPPYPHOSKIN-RXN
- direction:
- left-to-right
- common-name:
- gtp pyrophosphokinase
- gtp diphosphokinase
- ec-number:
Reaction formula
Gene(s) associated with this reaction
- Gene: SJ10100
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ07200
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ13961
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ14690
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
Pathway(s)
- PPGPPMET-PWY, ppGpp metabolism:
- 5 reactions found over 6 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
- METANETX-RXN : MNXR100457
- RHEA:
- LIGAND-RXN:
- UNIPROT: