Difference between revisions of "6.3.5.7-RXN"
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(Created page with "Category:reaction == Reaction DHBDEHYD-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.3.1.28 ec-1.3.1.28] == Reaction formula == * 1 [...") |
(Created page with "Category:reaction == Reaction 6.3.5.7-RXN == * direction: ** left-to-right * common-name: ** glutaminyl-trna synthase (glutamine-hydrolyzing) ** glutamyl-trna(gln) amidotr...") |
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(4 intermediate revisions by 2 users not shown) | |||
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction 6.3.5.7-RXN == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
+ | * common-name: | ||
+ | ** glutaminyl-trna synthase (glutamine-hydrolyzing) | ||
+ | ** glutamyl-trna(gln) amidotransferase | ||
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/6.3.5.7 ec-6.3.5.7] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[ATP]][c] '''+''' 1 [[GLN]][c] '''+''' 1 [[L-glutamyl-tRNAGln]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[Charged-GLN-tRNAs]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
− | ** Category: [[ | + | * Gene: [[SJ08904]] |
− | *** Source: [[ | + | ** Category: [[annotation]] |
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[SJ16279]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[SJ05621]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[SJ01848]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[SJ22527]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[SJ11756]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[SJ08903]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | </div> | ||
== Pathway(s) == | == Pathway(s) == | ||
− | * [[PWY- | + | * [[PWY-5921]], glutaminyl-tRNAgln biosynthesis via transamidation: |
− | ** '''2''' reactions found over ''' | + | ** '''2''' reactions found over '''4''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
− | * category: [[ | + | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
== External links == | == External links == | ||
+ | * METANETX-RXN : MNXR115648 | ||
* RHEA: | * RHEA: | ||
− | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17522 17522] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
− | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R03905 R03905] |
− | |||
− | |||
− | |||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: ec-number=ec- | + | {{#set: common-name=glutamyl-trna(gln) amidotransferase|glutaminyl-trna synthase (glutamine-hydrolyzing)}} |
− | {{#set: nb gene associated= | + | {{#set: ec-number=ec-6.3.5.7}} |
+ | {{#set: nb gene associated=7}} | ||
{{#set: nb pathway associated=1}} | {{#set: nb pathway associated=1}} | ||
− | {{#set: reconstruction category= | + | {{#set: reconstruction category=annotation}} |
− | {{#set: reconstruction tool= | + | {{#set: reconstruction tool=pathwaytools}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source= | + | {{#set: reconstruction source=saccharina_japonica_genome}} |
Latest revision as of 11:23, 18 March 2021
Contents
Reaction 6.3.5.7-RXN
- direction:
- left-to-right
- common-name:
- glutaminyl-trna synthase (glutamine-hydrolyzing)
- glutamyl-trna(gln) amidotransferase
- ec-number:
Reaction formula
- 1 ATP[c] + 1 GLN[c] + 1 L-glutamyl-tRNAGln[c] + 1 WATER[c] => 1 ADP[c] + 1 Charged-GLN-tRNAs[c] + 1 GLT[c] + 1 PROTON[c] + 1 Pi[c]
Gene(s) associated with this reaction
- Gene: SJ08904
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ16279
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ05621
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ01848
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ22527
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ11756
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ08903
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-5921, glutaminyl-tRNAgln biosynthesis via transamidation:
- 2 reactions found over 4 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links