Difference between revisions of "3-DEHYDRO-SHIKIMATE"

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(Created page with "Category:gene == Gene SJ13607 == * transcription-direction: ** positive * right-end-position: ** 170445 * left-end-position: ** 162284 * centisome-position: ** 48.715355...")
 
(Created page with "Category:metabolite == Metabolite 3-DEHYDRO-SHIKIMATE == * common-name: ** 3-dehydroshikimate * smiles: ** c([o-])(=o)c1(=cc(=o)c(o)c(o)c1) * inchi-key: ** slwwjzmphjjoph-...")
 
(9 intermediate revisions by 5 users not shown)
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ13607 ==
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== Metabolite 3-DEHYDRO-SHIKIMATE ==
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* transcription-direction:
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* common-name:
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** positive
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** 3-dehydroshikimate
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* right-end-position:
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* smiles:
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** 170445
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** c([o-])(=o)c1(=cc(=o)c(o)c(o)c1)
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* left-end-position:
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* inchi-key:
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** 162284
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** slwwjzmphjjoph-phdidxhhsa-m
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* centisome-position:
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* molecular-weight:
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** 48.715355   
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** 171.129
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[3-DEHYDROQUINATE-DEHYDRATASE-RXN]]
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== Reaction(s) associated ==
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* [[SHIKIMATE-5-DEHYDROGENASE-RXN]]
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* [[2.4.1.151-RXN]]
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== Reaction(s) known to produce the compound ==
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** Category: [[annotation]]
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* [[3-DEHYDROQUINATE-DEHYDRATASE-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-7968]]
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* [[RXN-1225]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=3-dehydroshikimate}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=slwwjzmphjjoph-phdidxhhsa-m}}
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* [[RXN-18302]]
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{{#set: molecular-weight=171.129}}
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== Pathway(s) associated ==
 
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* [[PWY-7434]]
 
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** '''5''' reactions found over '''8''' reactions in the full pathway
 
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* [[PWY-401]]
 
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** '''2''' reactions found over '''5''' reactions in the full pathway
 
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* [[PWY-7666]]
 
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** '''1''' reactions found over '''3''' reactions in the full pathway
 
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* [[PWY-7840]]
 
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** '''3''' reactions found over '''5''' reactions in the full pathway
 
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{{#set: transcription-direction=positive}}
 
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{{#set: right-end-position=170445}}
 
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{{#set: left-end-position=162284}}
 
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{{#set: centisome-position=48.715355    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=3}}
 
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{{#set: nb pathway associated=4}}
 

Latest revision as of 11:14, 18 March 2021

Metabolite 3-DEHYDRO-SHIKIMATE

  • common-name:
    • 3-dehydroshikimate
  • smiles:
    • c([o-])(=o)c1(=cc(=o)c(o)c(o)c1)
  • inchi-key:
    • slwwjzmphjjoph-phdidxhhsa-m
  • molecular-weight:
    • 171.129

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

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