Difference between revisions of "SJ11999"

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(Created page with "Category:gene == Gene SJ20639 == * transcription-direction: ** positive * right-end-position: ** 389712 * left-end-position: ** 377072 * centisome-position: ** 61.156994...")
(Created page with "Category:gene == Gene SJ11999 == * transcription-direction: ** negative * right-end-position: ** 125085 * left-end-position: ** 113150 * centisome-position: ** 31.231712...")
 
(3 intermediate revisions by 2 users not shown)
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ20639 ==
+
== Gene SJ11999 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 389712
+
** 125085
 
* left-end-position:
 
* left-end-position:
−
** 377072
+
** 113150
 
* centisome-position:
 
* centisome-position:
−
** 61.156994    
+
** 31.231712    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ARGSUCCINLYA-RXN]]
+
* [[SUPEROX-DISMUT-RXN]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-22]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
Line 25: Line 18:
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[ARGSYN-PWY]]
+
* [[DETOX1-PWY]]
−
** '''5''' reactions found over '''4''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-4983]]
+
* [[DETOX1-PWY-1]]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-7400]]
+
* [[PWY-6854]]
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
** '''2''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-4984]]
+
{{#set: transcription-direction=negative}}
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
{{#set: right-end-position=125085}}
−
* [[ARGSYNBSUB-PWY]]
+
{{#set: left-end-position=113150}}
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
{{#set: centisome-position=31.231712   }}
−
* [[PWY-5154]]
 
−
** '''8''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-5]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=389712}}
 
−
{{#set: left-end-position=377072}}
 
−
{{#set: centisome-position=61.156994   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=3}}

Latest revision as of 11:09, 18 March 2021

Gene SJ11999

  • transcription-direction:
    • negative
  • right-end-position:
    • 125085
  • left-end-position:
    • 113150
  • centisome-position:
    • 31.231712

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • DETOX1-PWY
    • 2 reactions found over 2 reactions in the full pathway
  • DETOX1-PWY-1
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-6854
    • 2 reactions found over 7 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ11999&oldid=135895"