Difference between revisions of "SJ05198"

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(Created page with "Category:gene == Gene SJ16475 == * transcription-direction: ** positive * right-end-position: ** 49104 * left-end-position: ** 40372 * centisome-position: ** 14.320985...")
(Created page with "Category:gene == Gene SJ05198 == * transcription-direction: ** negative * right-end-position: ** 316553 * left-end-position: ** 310697 * centisome-position: ** 62.071247...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ16475 ==
+
== Gene SJ05198 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 49104
+
** 316553
 
* left-end-position:
 
* left-end-position:
−
** 40372
+
** 310697
 
* centisome-position:
 
* centisome-position:
−
** 14.320985    
+
** 62.071247    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[1.1.1.8-RXN]]
+
* [[RXN-9839]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[GLYC3PDEHYDROGBIOSYN-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6118]]
+
* [[PWY-6082]]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''3''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-7385]]
+
* [[PWY-6073]]
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7411]]
+
{{#set: transcription-direction=negative}}
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
{{#set: right-end-position=316553}}
−
* [[PWY-7902]]
+
{{#set: left-end-position=310697}}
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
{{#set: centisome-position=62.071247   }}
−
* [[PWY-5981]]
 
−
** '''3''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY0-1319]]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5667]]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=49104}}
 
−
{{#set: left-end-position=40372}}
 
−
{{#set: centisome-position=14.320985   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=2}}

Latest revision as of 11:10, 18 March 2021

Gene SJ05198

  • transcription-direction:
    • negative
  • right-end-position:
    • 316553
  • left-end-position:
    • 310697
  • centisome-position:
    • 62.071247

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6082
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-6073
    • 3 reactions found over 3 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ05198&oldid=136250"