Difference between revisions of "CPD-15189"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UROGENIIISYN-RXN UROGENIIISYN-RXN] == * direction: ** left-to-right * common-name: ** uroporphyrino...")
 
(Created page with "Category:metabolite == Metabolite CPD-15189 == * common-name: ** chenodeoxycholate * smiles: ** cc(ccc(=o)[o-])[ch]2(cc[ch]3([ch]4(c(o)c[ch]1(cc(o)ccc(c)1[ch](ccc(c)23)4))...")
 
(9 intermediate revisions by 5 users not shown)
Line 1: Line 1:
−
[[Category:reaction]]
+
[[Category:metabolite]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UROGENIIISYN-RXN UROGENIIISYN-RXN] ==
+
== Metabolite CPD-15189 ==
−
* direction:
 
−
** left-to-right
 
 
* common-name:
 
* common-name:
−
** uroporphyrinogen iii synthase
+
** chenodeoxycholate
−
* ec-number:
+
* smiles:
−
** [http://enzyme.expasy.org/EC/4.2.1.75 ec-4.2.1.75]
+
** cc(ccc(=o)[o-])[ch]2(cc[ch]3([ch]4(c(o)c[ch]1(cc(o)ccc(c)1[ch](ccc(c)23)4))))
−
== Reaction formula ==
+
* inchi-key:
−
* 1 [[HYDROXYMETHYLBILANE]][c] '''=>''' 1 [[UROPORPHYRINOGEN-III]][c] '''+''' 1 [[WATER]][c]
+
** rudatbohqwojdd-bswaidmhsa-m
−
== Gene(s) associated with this reaction  ==
+
* molecular-weight:
−
* Gene: [[SJ19532]]
+
** 391.57
−
** Category: [[annotation]]
+
== Reaction(s) known to consume the compound ==
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
* [[RXN-16033]]
−
** Category: [[orthology]]
+
== Reaction(s) known to produce the compound ==
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
== Reaction(s) of unknown directionality ==
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
{{#set: common-name=chenodeoxycholate}}
−
== Pathway(s) ==
+
{{#set: inchi-key=inchikey=rudatbohqwojdd-bswaidmhsa-m}}
−
* [[PWY-5189]], tetrapyrrole biosynthesis II (from glycine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5189 PWY-5189]
+
{{#set: molecular-weight=391.57}}
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5188]], tetrapyrrole biosynthesis I (from glutamate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5188 PWY-5188]
 
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
−
== Reconstruction information  ==
 
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
== External links  ==
 
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18965 18965]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R03165 R03165]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P10746 P10746]
 
−
** [http://www.uniprot.org/uniprot/P51163 P51163]
 
−
** [http://www.uniprot.org/uniprot/P21248 P21248]
 
−
** [http://www.uniprot.org/uniprot/Q58401 Q58401]
 
−
** [http://www.uniprot.org/uniprot/P09126 P09126]
 
−
** [http://www.uniprot.org/uniprot/Q59294 Q59294]
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=uroporphyrinogen iii synthase}}
 
−
{{#set: ec-number=ec-4.2.1.75}}
 
−
{{#set: nb gene associated=1}}
 
−
{{#set: nb pathway associated=2}}
 
−
{{#set: reconstruction category=orthology|annotation}}
 
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
 

Latest revision as of 11:15, 18 March 2021

Metabolite CPD-15189

  • common-name:
    • chenodeoxycholate
  • smiles:
    • cc(ccc(=o)[o-])[ch]2(cc[ch]3([ch]4(c(o)c[ch]1(cc(o)ccc(c)1[ch](ccc(c)23)4))))
  • inchi-key:
    • rudatbohqwojdd-bswaidmhsa-m
  • molecular-weight:
    • 391.57

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-15189&oldid=138676"