Difference between revisions of "SJ18438"

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(Created page with "Category:gene == Gene SJ20427 == * transcription-direction: ** negative * right-end-position: ** 499923 * left-end-position: ** 490119 * centisome-position: ** 43.15518...")
(Created page with "Category:gene == Gene SJ18438 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * 2.1.1.71-RXN ** Catego...")
 
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ20427 ==
+
== Gene SJ18438 ==
* transcription-direction:
 
** negative
 
* right-end-position:
 
** 499923
 
* left-end-position:
 
** 490119
 
* centisome-position:
 
** 43.15518   
 
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[APIGNAR-RXN]]
+
* [[2.1.1.71-RXN]]
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* [[CHALCONE-ISOMERASE-RXN]]
+
* [[RXN4FS-2]]
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-3221]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN-7647]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[PWY1F-FLAVSYN]]
+
* [[PWY-6825]]
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
* [[PWY-6787]]
+
* [[PWY4FS-3]]
** '''6''' reactions found over '''10''' reactions in the full pathway
+
** '''2''' reactions found over '''5''' reactions in the full pathway
* [[PWY-7397]]
+
* [[PWY4FS-4]]
** '''3''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-7897]]
 
** '''3''' reactions found over '''15''' reactions in the full pathway
 
* [[PWY-2002]]
 
** '''1''' reactions found over '''5''' reactions in the full pathway
 
* [[PWY-6325]]
 
 
** '''1''' reactions found over '''5''' reactions in the full pathway
 
** '''1''' reactions found over '''5''' reactions in the full pathway
* [[PWY-5059]]
 
** '''3''' reactions found over '''5''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: right-end-position=499923}}
 
{{#set: left-end-position=490119}}
 
{{#set: centisome-position=43.15518    }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=2}}
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=3}}

Latest revision as of 11:02, 18 March 2021

Gene SJ18438

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6825
    • 3 reactions found over 3 reactions in the full pathway
  • PWY4FS-3
    • 2 reactions found over 5 reactions in the full pathway
  • PWY4FS-4
    • 1 reactions found over 5 reactions in the full pathway