Difference between revisions of "SJ00206"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ21859 == * transcription-direction: ** negative * right-end-position: ** 141374 * left-end-position: ** 130906 * centisome-position: ** 70.79788...")
(Created page with "Category:gene == Gene SJ00206 == * transcription-direction: ** positive * right-end-position: ** 315571 * left-end-position: ** 314684 * centisome-position: ** 55.23621...")
 
(2 intermediate revisions by 2 users not shown)
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ21859 ==
+
== Gene SJ00206 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 141374
+
** 315571
 
* left-end-position:
 
* left-end-position:
−
** 130906
+
** 314684
 
* centisome-position:
 
* centisome-position:
−
** 70.79788    
+
** 55.23621    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[FADSYN-RXN]]
−
* [[ARACHIDONATE-15-LIPOXYGENASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[ARACHIDONATE-5-LIPOXYGENASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-1321]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-13395]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-8497]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-8647]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY66-375]]
+
* [[PWY66-366]]
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-5410]]
+
* [[RIBOSYN2-PWY]]
−
** '''2''' reactions found over '''9''' reactions in the full pathway
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-735]]
+
* [[PWY-6167]]
−
** '''16''' reactions found over '''19''' reactions in the full pathway
+
** '''5''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY66-392]]
+
* [[PWY-6168]]
−
** '''1''' reactions found over '''11''' reactions in the full pathway
+
** '''7''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-6917]]
+
{{#set: transcription-direction=positive}}
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
{{#set: right-end-position=315571}}
−
* [[PWY-5406]]
+
{{#set: left-end-position=314684}}
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
{{#set: centisome-position=55.23621   }}
−
* [[PWY-5407]]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5408]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=141374}}
 
−
{{#set: left-end-position=130906}}
 
−
{{#set: centisome-position=70.79788   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=8}}
+
{{#set: nb pathway associated=4}}

Latest revision as of 11:08, 18 March 2021

Gene SJ00206

  • transcription-direction:
    • positive
  • right-end-position:
    • 315571
  • left-end-position:
    • 314684
  • centisome-position:
    • 55.23621

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY66-366
    • 2 reactions found over 2 reactions in the full pathway
  • RIBOSYN2-PWY
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-6167
    • 5 reactions found over 10 reactions in the full pathway
  • PWY-6168
    • 7 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ00206&oldid=135486"