Difference between revisions of "SJ01455"

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(Created page with "Category:gene == Gene SJ00485 == * transcription-direction: ** positive * right-end-position: ** 118882 * left-end-position: ** 102950 * centisome-position: ** 61.840748...")
(Created page with "Category:gene == Gene SJ01455 == * transcription-direction: ** negative * right-end-position: ** 31133 * left-end-position: ** 27120 * centisome-position: ** 17.95515...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ00485 ==
+
== Gene SJ01455 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 118882
+
** 31133
 
* left-end-position:
 
* left-end-position:
−
** 102950
+
** 27120
 
* centisome-position:
 
* centisome-position:
−
** 61.840748    
+
** 17.95515    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ACETYL-COA-CARBOXYLTRANSFER-RXN]]
+
* [[ATDTM]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* [[BIOTIN-CARBOXYL-RXN]]
+
* [[DTMPKI-RXN]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[PYRUVATE-CARBOXYLASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-7184]]
−
* [[PWY-7388]]
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
** '''7''' reactions found over '''11''' reactions in the full pathway
+
* [[PWY-6545]]
−
* [[PWY-6679]]
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
** '''1''' reactions found over '''9''' reactions in the full pathway
+
* [[PWY-7187]]
−
* [[PWY-5744]]
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
** '''4''' reactions found over '''13''' reactions in the full pathway
+
* [[PWY0-166]]
−
* [[PWY-5743]]
+
** '''14''' reactions found over '''13''' reactions in the full pathway
−
** '''5''' reactions found over '''13''' reactions in the full pathway
+
* [[PWY-7210]]
−
* [[PWY-5789]]
+
** '''8''' reactions found over '''8''' reactions in the full pathway
−
** '''8''' reactions found over '''18''' reactions in the full pathway
+
* [[PWY-7198]]
−
* [[PWY0-1264]]
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
* [[PWY-7197]]
−
* [[PWY-5750]]
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
** '''3''' reactions found over '''2''' reactions in the full pathway
+
{{#set: transcription-direction=negative}}
−
* [[P42-PWY]]
+
{{#set: right-end-position=31133}}
−
** '''5''' reactions found over '''7''' reactions in the full pathway
+
{{#set: left-end-position=27120}}
−
* [[PWY66-399]]
+
{{#set: centisome-position=17.95515   }}
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-6146]]
 
−
** '''9''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-6142]]
 
−
** '''10''' reactions found over '''13''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=118882}}
 
−
{{#set: left-end-position=102950}}
 
−
{{#set: centisome-position=61.840748   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=11}}
+
{{#set: nb pathway associated=7}}

Latest revision as of 11:09, 18 March 2021

Gene SJ01455

  • transcription-direction:
    • negative
  • right-end-position:
    • 31133
  • left-end-position:
    • 27120
  • centisome-position:
    • 17.95515

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7187
    • 6 reactions found over 7 reactions in the full pathway
  • PWY0-166
    • 14 reactions found over 13 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7197
    • 4 reactions found over 4 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ01455&oldid=136055"