Difference between revisions of "ASPARAGINE--TRNA-LIGASE-RXN"
Jump to navigation
Jump to search
(Created page with "Category:reaction == Reaction METHYLENETHFDEHYDROG-NADP-RXN == * direction: ** reversible * common-name: ** methylenetetrahydrofolate dehydrogenase (nadp+) ** methylenetet...") |
(Created page with "Category:reaction == Reaction ASPARAGINE--TRNA-LIGASE-RXN == * direction: ** left-to-right * common-name: ** asparagine-trna ligase * ec-number: ** [http://enzyme.expasy.o...") |
||
Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction ASPARAGINE--TRNA-LIGASE-RXN == |
* direction: | * direction: | ||
− | ** | + | ** left-to-right |
* common-name: | * common-name: | ||
− | ** | + | ** asparagine-trna ligase |
− | |||
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/1 | + | ** [http://enzyme.expasy.org/EC/6.1.1.22 ec-6.1.1.22] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[ASN]][c] '''+''' 1 [[ASN-tRNAs]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-ASN-tRNAs]][c] '''+''' 1 [[PPI]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | + | * Gene: [[SJ20233]] | |
− | * Gene: [[ | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
− | * Gene: [[ | + | * Gene: [[SJ18954]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
− | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
== Pathway(s) == | == Pathway(s) == | ||
− | * [[ | + | * [[TRNA-CHARGING-PWY]], tRNA charging: |
− | + | ** '''21''' reactions found over '''21''' reactions in the full pathway | |
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | ** ''' | ||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
− | |||
* RHEA: | * RHEA: | ||
− | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11181 11181] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
− | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R03648 R03648] |
* UNIPROT: | * UNIPROT: | ||
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/P39772 P39772] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/O57980 O57980] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/Q9V251 Q9V251] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/Q9CEK9 Q9CEK9] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/P47359 P47359] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/O51128 O51128] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/O83618 O83618] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/O58008 O58008] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/O96198 O96198] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/P54262 P54262] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/P75521 P75521] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/Q48966 Q48966] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/P0A8M0 P0A8M0] |
− | + | {{#set: direction=left-to-right}} | |
− | + | {{#set: common-name=asparagine-trna ligase}} | |
− | + | {{#set: ec-number=ec-6.1.1.22}} | |
− | + | {{#set: nb gene associated=2}} | |
− | + | {{#set: nb pathway associated=1}} | |
− | |||
− | {{#set: direction= | ||
− | {{#set: common-name= | ||
− | {{#set: ec-number=ec-1 | ||
− | {{#set: nb gene associated= | ||
− | {{#set: nb pathway associated= | ||
{{#set: reconstruction category=annotation|orthology}} | {{#set: reconstruction category=annotation|orthology}} | ||
{{#set: reconstruction tool=pathwaytools|pantograph}} | {{#set: reconstruction tool=pathwaytools|pantograph}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 11:26, 15 January 2021
Contents
Reaction ASPARAGINE--TRNA-LIGASE-RXN
- direction:
- left-to-right
- common-name:
- asparagine-trna ligase
- ec-number:
Reaction formula
Gene(s) associated with this reaction
- Gene: SJ20233
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ18954
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- TRNA-CHARGING-PWY, tRNA charging:
- 21 reactions found over 21 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
- RHEA:
- LIGAND-RXN:
- UNIPROT: