Difference between revisions of "RXN-982"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=BRANCHED-CHAINAMINOTRANSFERILEU-RXN BRANCHED-CHAINAMINOTRANSFERILEU-RXN] == * direction: ** reversi...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN 4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN] == * direction: **...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=BRANCHED-CHAINAMINOTRANSFERILEU-RXN BRANCHED-CHAINAMINOTRANSFERILEU-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN 4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN] ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** isoleucine transaminase
+
** 4-hydroxyphenylpyruvate dioxygenase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.6.1.42 ec-2.6.1.42]
+
** [http://enzyme.expasy.org/EC/1.13.11.27 ec-1.13.11.27]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[ILE]][c] '''<=>''' 1 [[2-KETO-3-METHYL-VALERATE]][c] '''+''' 1 [[GLT]][c]
+
* 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[P-HYDROXY-PHENYLPYRUVATE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[HOMOGENTISATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ08954]]
−
* Gene: [[SJ04586]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ08953]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ06412]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ13018]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ17677]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[ILEUSYN-PWY]], L-isoleucine biosynthesis I (from threonine): [http://metacyc.org/META/NEW-IMAGE?object=ILEUSYN-PWY ILEUSYN-PWY]
+
* [[PWY-7432]], L-phenylalanine biosynthesis III (cytosolic, plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7432 PWY-7432]
−
** '''4''' reactions found over '''7''' reactions in the full pathway
+
** '''3''' reactions found over '''2''' reactions in the full pathway
−
* [[ILEUDEG-PWY]], L-isoleucine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=ILEUDEG-PWY ILEUDEG-PWY]
+
* [[TYRFUMCAT-PWY]], L-tyrosine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=TYRFUMCAT-PWY TYRFUMCAT-PWY]
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
** '''2''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-5078]], L-isoleucine degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5078 PWY-5078]
+
* [[PWY-1581]], plastoquinol-9 biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1581 PWY-1581]
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-5103]], L-isoleucine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5103 PWY-5103]
+
* [[PWY-1422]], vitamin E biosynthesis (tocopherols): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1422 PWY-1422]
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
** '''5''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-5104]], L-isoleucine biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5104 PWY-5104]
 
−
** '''2''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-5101]], L-isoleucine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5101 PWY-5101]
 
−
** '''4''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-5108]], L-isoleucine biosynthesis V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5108 PWY-5108]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24804 24804]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16190 16190]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02199 R02199]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02521 R02521]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q9PIM6 Q9PIM6]
+
** [http://www.uniprot.org/uniprot/P32754 P32754]
−
** [http://www.uniprot.org/uniprot/P38891 P38891]
+
** [http://www.uniprot.org/uniprot/Q02110 Q02110]
−
** [http://www.uniprot.org/uniprot/P47176 P47176]
+
** [http://www.uniprot.org/uniprot/P32755 P32755]
−
** [http://www.uniprot.org/uniprot/O86505 O86505]
+
** [http://www.uniprot.org/uniprot/O48604 O48604]
−
** [http://www.uniprot.org/uniprot/O14370 O14370]
+
** [http://www.uniprot.org/uniprot/O23920 O23920]
−
** [http://www.uniprot.org/uniprot/O32954 O32954]
+
** [http://www.uniprot.org/uniprot/P93836 P93836]
−
** [http://www.uniprot.org/uniprot/P0AB80 P0AB80]
+
{{#set: direction=left-to-right}}
−
{{#set: direction=reversible}}
+
{{#set: common-name=4-hydroxyphenylpyruvate dioxygenase}}
−
{{#set: common-name=isoleucine transaminase}}
+
{{#set: ec-number=ec-1.13.11.27}}
−
{{#set: ec-number=ec-2.6.1.42}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb gene associated=4}}
+
{{#set: nb pathway associated=4}}
−
{{#set: nb pathway associated=7}}
 
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}}

Revision as of 14:26, 26 August 2019

Reaction 4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • 4-hydroxyphenylpyruvate dioxygenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7432, L-phenylalanine biosynthesis III (cytosolic, plants): PWY-7432
    • 3 reactions found over 2 reactions in the full pathway
  • TYRFUMCAT-PWY, L-tyrosine degradation I: TYRFUMCAT-PWY
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-1581, plastoquinol-9 biosynthesis I: PWY-1581
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-1422, vitamin E biosynthesis (tocopherols): PWY-1422
    • 5 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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