Difference between revisions of "ARACHIDONATE-5-LIPOXYGENASE-RXN"
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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=H2Otx H2Otx] == * direction: ** reversible * common-name: ** h2o transport, peroxisomal == Reaction...") |
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PROPIONYL-COA-CARBOXY-RXN PROPIONYL-COA-CARBOXY-RXN] == * direction: ** reversible * common-name: *...") |
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Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PROPIONYL-COA-CARBOXY-RXN PROPIONYL-COA-CARBOXY-RXN] == |
* direction: | * direction: | ||
** reversible | ** reversible | ||
* common-name: | * common-name: | ||
− | ** | + | ** propionyl-coa carboxylase |
+ | * ec-number: | ||
+ | ** [http://enzyme.expasy.org/EC/6.4.1.3 ec-6.4.1.3] | ||
== Reaction formula == | == Reaction formula == | ||
− | * 1 | + | * 1 [[ATP]][c] '''+''' 1 [[HCO3]][c] '''+''' 1 [[PROPIONYL-COA]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[D-METHYL-MALONYL-COA]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[SJ12870]] |
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
− | *** Source: [[ | + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
− | * Gene: [[ | + | * Gene: [[SJ08104]] |
− | ** Category: [[ | + | ** Category: [[annotation]] |
− | *** Source: [[ | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
== Pathway(s) == | == Pathway(s) == | ||
+ | * [[PWY-5789]], 3-hydroxypropanoate/4-hydroxybutanate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5789 PWY-5789] | ||
+ | ** '''8''' reactions found over '''18''' reactions in the full pathway | ||
+ | * [[PWY-5743]], 3-hydroxypropanoate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5743 PWY-5743] | ||
+ | ** '''5''' reactions found over '''13''' reactions in the full pathway | ||
+ | * [[PROPIONMET-PWY]], propanoyl CoA degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PROPIONMET-PWY PROPIONMET-PWY] | ||
+ | ** '''1''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-6728]], methylaspartate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6728 PWY-6728] | ||
+ | ** '''11''' reactions found over '''19''' reactions in the full pathway | ||
+ | * [[PWY-7384]], anaerobic energy metabolism (invertebrates, mitochondrial): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7384 PWY-7384] | ||
+ | ** '''6''' reactions found over '''10''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
− | * category: [[orthology]]; source: [[ | + | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23723 23723] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R01859 R01859] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/Q96CX0 Q96CX0] | ||
+ | ** [http://www.uniprot.org/uniprot/P07633 P07633] | ||
+ | ** [http://www.uniprot.org/uniprot/P05165 P05165] | ||
+ | ** [http://www.uniprot.org/uniprot/Q06101 Q06101] | ||
+ | ** [http://www.uniprot.org/uniprot/Q20676 Q20676] | ||
+ | ** [http://www.uniprot.org/uniprot/O24789 O24789] | ||
{{#set: direction=reversible}} | {{#set: direction=reversible}} | ||
− | {{#set: common-name= | + | {{#set: common-name=propionyl-coa carboxylase}} |
+ | {{#set: ec-number=ec-6.4.1.3}} | ||
{{#set: nb gene associated=2}} | {{#set: nb gene associated=2}} | ||
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=5}} |
− | {{#set: reconstruction category=orthology}} | + | {{#set: reconstruction category=orthology|annotation}} |
− | {{#set: reconstruction tool=pantograph}} | + | {{#set: reconstruction tool=pantograph|pathwaytools}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source= | + | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 14:26, 26 August 2019
Contents
Reaction PROPIONYL-COA-CARBOXY-RXN
- direction:
- reversible
- common-name:
- propionyl-coa carboxylase
- ec-number:
Reaction formula
- 1 ATP[c] + 1 HCO3[c] + 1 PROPIONYL-COA[c] <=> 1 ADP[c] + 1 D-METHYL-MALONYL-COA[c] + 1 PROTON[c] + 1 Pi[c]
Gene(s) associated with this reaction
- Gene: SJ12870
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ08104
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-5789, 3-hydroxypropanoate/4-hydroxybutanate cycle: PWY-5789
- 8 reactions found over 18 reactions in the full pathway
- PWY-5743, 3-hydroxypropanoate cycle: PWY-5743
- 5 reactions found over 13 reactions in the full pathway
- PROPIONMET-PWY, propanoyl CoA degradation I: PROPIONMET-PWY
- 1 reactions found over 3 reactions in the full pathway
- PWY-6728, methylaspartate cycle: PWY-6728
- 11 reactions found over 19 reactions in the full pathway
- PWY-7384, anaerobic energy metabolism (invertebrates, mitochondrial): PWY-7384
- 6 reactions found over 10 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links