Difference between revisions of "SJ03774"

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(Created page with "Category:gene == Gene SJ16901 == * transcription-direction: ** negative * right-end-position: ** 128364 * left-end-position: ** 110101 * centisome-position: ** 39.93638...")
(Created page with "Category:gene == Gene SJ07227 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * RXN-8025 ** Category:...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ16901 ==
+
== Gene SJ07227 ==
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* transcription-direction:
 
−
** negative
 
−
* right-end-position:
 
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** 128364
 
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* left-end-position:
 
−
** 110101
 
−
* centisome-position:
 
−
** 39.93638   
 
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[RXN-8025]]
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* [[4-COUMARATE--COA-LIGASE-RXN]]
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** Category: [[manual]]
 +
*** source: [[sjap]]; tool: [[unknown-tool]]; comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
 +
* [[RXN-8026]]
 +
** Category: [[manual]]
 +
*** source: [[sjap]]; tool: [[unknown-tool]]; comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
 +
* [[RXN1F-152]]
 +
** Category: [[manual]]
 +
*** source: [[sjap]]; tool: [[unknown-tool]]; comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
 +
* [[UNSPECIFIC-MONOOXYGENASE-RXN]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[6.2.1.34-RXN]]
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* [[ACETATE--COA-LIGASE-RXN]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[BUTYRATE--COA-LIGASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-10919]]
 
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** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* [[RXN-1126]]
 
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** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-2001]]
 
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** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[PWY-5944]]
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* [[PWY-7397]]
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** '''2''' reactions found over '''2''' reactions in the full pathway
−
** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-7638]]
−
* [[PWY-6320]]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6435]]
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY1F-FLAVSYN]]
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-361]]
 
−
** '''7''' reactions found over '''15''' reactions in the full pathway
 
−
* [[PWY-5135]]
 
 
** '''2''' reactions found over '''4''' reactions in the full pathway
 
** '''2''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-7398]]
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* [[PWY-5288]]
−
** '''3''' reactions found over '''13''' reactions in the full pathway
+
** '''2''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-7046]]
 
−
** '''2''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-7897]]
 
−
** '''3''' reactions found over '''15''' reactions in the full pathway
 
−
* [[PWY-5754]]
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6920]]
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-6982]]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6343]]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-1121]]
 
−
** '''9''' reactions found over '''19''' reactions in the full pathway
 
−
* [[PWY66-161]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7118]]
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY66-162]]
 
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** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY0-1313]]
 
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** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY-6672]]
 
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** '''4''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY66-21]]
 
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** '''3''' reactions found over '''3''' reactions in the full pathway
 
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* [[PWY-7007]]
 
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** '''4''' reactions found over '''6''' reactions in the full pathway
 
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* [[PWY-6673]]
 
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** '''1''' reactions found over '''3''' reactions in the full pathway
 
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* [[PWY-6457]]
 
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=128364}}
 
−
{{#set: left-end-position=110101}}
 
−
{{#set: centisome-position=39.93638    }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=7}}
+
{{#set: nb reaction associated=4}}
−
{{#set: nb pathway associated=23}}
+
{{#set: nb pathway associated=3}}

Revision as of 08:16, 15 March 2021

Gene SJ07227

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5944
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7638
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-5288
    • 2 reactions found over 10 reactions in the full pathway


Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ03774&oldid=120151"