Difference between revisions of "SJ00853"

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(Created page with "Category:gene == Gene SJ16632 == * transcription-direction: ** positive * right-end-position: ** 50968 * left-end-position: ** 23120 * centisome-position: ** 8.296224...")
(Created page with "Category:gene == Gene SJ11908 == * transcription-direction: ** positive * right-end-position: ** 329076 * left-end-position: ** 310356 * centisome-position: ** 40.133297...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ16632 ==
+
== Gene SJ11908 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
** 50968
+
** 329076
 
* left-end-position:
 
* left-end-position:
** 23120
+
** 310356
 
* centisome-position:
 
* centisome-position:
** 8.296224    
+
** 40.133297    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[DXPREDISOM-RXN]]
* [[ARACHIDONATE-5-LIPOXYGENASE-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[LIPOXYGENASE-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-1321]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* [[RXN-13395]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-8497]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN-8647]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[PWY66-375]]
+
* [[PWY-7560]]
** '''5''' reactions found over '''6''' reactions in the full pathway
+
** '''9''' reactions found over '''9''' reactions in the full pathway
* [[PWY-5410]]
+
* [[NONMEVIPP-PWY]]
** '''2''' reactions found over '''9''' reactions in the full pathway
+
** '''9''' reactions found over '''9''' reactions in the full pathway
* [[PWY-5409]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
* [[PWY-735]]
 
** '''16''' reactions found over '''19''' reactions in the full pathway
 
* [[PWY66-392]]
 
** '''1''' reactions found over '''11''' reactions in the full pathway
 
* [[PWY-6917]]
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-5406]]
 
** '''1''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-5407]]
 
** '''1''' reactions found over '''5''' reactions in the full pathway
 
* [[PWY-5408]]
 
** '''1''' reactions found over '''4''' reactions in the full pathway
 
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
{{#set: right-end-position=50968}}
+
{{#set: right-end-position=329076}}
{{#set: left-end-position=23120}}
+
{{#set: left-end-position=310356}}
{{#set: centisome-position=8.296224   }}
+
{{#set: centisome-position=40.133297   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=1}}
{{#set: nb pathway associated=9}}
+
{{#set: nb pathway associated=2}}

Revision as of 08:18, 15 March 2021

Gene SJ11908

  • transcription-direction:
    • positive
  • right-end-position:
    • 329076
  • left-end-position:
    • 310356
  • centisome-position:
    • 40.133297

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7560
    • 9 reactions found over 9 reactions in the full pathway
  • NONMEVIPP-PWY
    • 9 reactions found over 9 reactions in the full pathway