Difference between revisions of "SJ02288"

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(Created page with "Category:gene == Gene SJ13486 == * transcription-direction: ** positive * right-end-position: ** 7446 * left-end-position: ** 632 * centisome-position: ** 5.0555954 ==...")
(Created page with "Category:gene == Gene SJ07100 == * transcription-direction: ** negative * right-end-position: ** 42927 * left-end-position: ** 24927 * centisome-position: ** 35.055126...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ13486 ==
+
== Gene SJ07100 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 7446
+
** 42927
 
* left-end-position:
 
* left-end-position:
** 632
+
** 24927
 
* centisome-position:
 
* centisome-position:
** 5.0555954    
+
** 35.055126    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[RXN-9839]]
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[RXN1G-1435]]
+
** Category: [[orthology]]
** Category: [[annotation]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN1G-1436]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN1G-1437]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN1G-1438]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN1G-1439]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[TREHALOSE6PSYN-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[TREHALOSEPHOSPHA-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[PWYG-321]]
+
* [[PWY-6082]]
** '''26''' reactions found over '''182''' reactions in the full pathway
+
** '''3''' reactions found over '''7''' reactions in the full pathway
* [[TRESYN-PWY]]
+
* [[PWY-6073]]
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
* [[PWY-7900]]
+
{{#set: transcription-direction=negative}}
** '''2''' reactions found over '''8''' reactions in the full pathway
+
{{#set: right-end-position=42927}}
* [[PWY-881]]
+
{{#set: left-end-position=24927}}
** '''1''' reactions found over '''2''' reactions in the full pathway
+
{{#set: centisome-position=35.055126   }}
* [[TREHALOSESYN-PWY]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=7446}}
 
{{#set: left-end-position=632}}
 
{{#set: centisome-position=5.0555954   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=8}}
+
{{#set: nb reaction associated=1}}
{{#set: nb pathway associated=5}}
+
{{#set: nb pathway associated=2}}

Revision as of 08:18, 15 March 2021

Gene SJ07100

  • transcription-direction:
    • negative
  • right-end-position:
    • 42927
  • left-end-position:
    • 24927
  • centisome-position:
    • 35.055126

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6082
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-6073
    • 3 reactions found over 3 reactions in the full pathway