Difference between revisions of "SJ20305"

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(Created page with "Category:gene == Gene SJ10377 == * transcription-direction: ** negative * right-end-position: ** 726933 * left-end-position: ** 709554 * centisome-position: ** 87.70407...")
(Created page with "Category:gene == Gene SJ09481 == * transcription-direction: ** positive * right-end-position: ** 36467 * left-end-position: ** 33507 * centisome-position: ** 82.598724...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ10377 ==
+
== Gene SJ09481 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 726933
+
** 36467
 
* left-end-position:
 
* left-end-position:
−
** 709554
+
** 33507
 
* centisome-position:
 
* centisome-position:
−
** 87.70407    
+
** 82.598724    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ARGSUCCINSYN-RXN]]
+
* [[3.1.3.46-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* [[6-PHOSPHOFRUCTO-2-KINASE-RXN]]
−
* [[RXN-10]]
+
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[SUGAR-PHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7400]]
+
* [[PWY66-423]]
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-4984]]
+
{{#set: transcription-direction=positive}}
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
{{#set: right-end-position=36467}}
−
* [[ARGSYN-PWY]]
+
{{#set: left-end-position=33507}}
−
** '''5''' reactions found over '''4''' reactions in the full pathway
+
{{#set: centisome-position=82.598724   }}
−
* [[ARGSYNBSUB-PWY]]
 
−
** '''9''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-4983]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-5154]]
 
−
** '''8''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-5]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=726933}}
 
−
{{#set: left-end-position=709554}}
 
−
{{#set: centisome-position=87.70407   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=4}}
−
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=1}}

Revision as of 08:21, 15 March 2021

Gene SJ09481

  • transcription-direction:
    • positive
  • right-end-position:
    • 36467
  • left-end-position:
    • 33507
  • centisome-position:
    • 82.598724

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY66-423
    • 2 reactions found over 2 reactions in the full pathway




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