Difference between revisions of "SJ04385"
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(Created page with "Category:gene == Gene SJ11238 == * transcription-direction: ** positive * right-end-position: ** 355814 * left-end-position: ** 345192 * centisome-position: ** 91.59907...") |
(Created page with "Category:gene == Gene SJ04385 == * transcription-direction: ** positive * right-end-position: ** 72247 * left-end-position: ** 68570 * centisome-position: ** 63.592606...") |
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Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ04385 == |
* transcription-direction: | * transcription-direction: | ||
** positive | ** positive | ||
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 72247 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 68570 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 63.592606 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[RXN- | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
− | ** Category: [[ | + | * [[1.1.1.145-RXN]] |
− | *** source: [[ | + | ** Category: [[annotation]] |
− | *** source: [[ | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
− | * [[RXN- | + | * [[RXN-12693]] |
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-12747]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-12789]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN66-342]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN66-350]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN66-353]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[UDP-GLUCURONATE-4-EPIMERASE-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
+ | </div> | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
− | * [[PWY- | + | * [[PWY-6946]] |
− | ** '''6''' reactions found over ''' | + | ** '''6''' reactions found over '''22''' reactions in the full pathway |
− | * [[ | + | * [[PWY-6944]] |
− | ** ''' | + | ** '''2''' reactions found over '''25''' reactions in the full pathway |
+ | * [[PWY-6948]] | ||
+ | ** '''2''' reactions found over '''18''' reactions in the full pathway | ||
+ | * [[PWY66-378]] | ||
+ | ** '''3''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PWY-7299]] | ||
+ | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY-6415]] | ||
+ | ** '''4''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[PWY-4861]] | ||
+ | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
{{#set: transcription-direction=positive}} | {{#set: transcription-direction=positive}} | ||
− | {{#set: right-end-position= | + | {{#set: right-end-position=72247}} |
− | {{#set: left-end-position= | + | {{#set: left-end-position=68570}} |
− | {{#set: centisome-position= | + | {{#set: centisome-position=63.592606 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=8}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=7}} |
Revision as of 08:23, 15 March 2021
Contents
Gene SJ04385
- transcription-direction:
- positive
- right-end-position:
- 72247
- left-end-position:
- 68570
- centisome-position:
- 63.592606
Organism(s) associated with this gene
Reaction(s) associated
- 1.1.1.145-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-12693
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-12747
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-12789
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN66-342
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN66-350
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN66-353
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- UDP-GLUCURONATE-4-EPIMERASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-6946
- 6 reactions found over 22 reactions in the full pathway
- PWY-6944
- 2 reactions found over 25 reactions in the full pathway
- PWY-6948
- 2 reactions found over 18 reactions in the full pathway
- PWY66-378
- 3 reactions found over 6 reactions in the full pathway
- PWY-7299
- 1 reactions found over 2 reactions in the full pathway
- PWY-6415
- 4 reactions found over 7 reactions in the full pathway
- PWY-4861
- 1 reactions found over 1 reactions in the full pathway