Difference between revisions of "PREPHENATE-DEHYDROGENASE-NADP+-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTPRATPHYD-RXN HISTPRATPHYD-RXN] == * direction: ** left-to-right * common-name: ** phosphoribosy...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDROOROT-RXN DIHYDROOROT-RXN] == * direction: ** reversible * common-name: ** dihydroorotase * e...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTPRATPHYD-RXN HISTPRATPHYD-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDROOROT-RXN DIHYDROOROT-RXN] ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** phosphoribosyl-atp pyrophosphatase
+
** dihydroorotase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.6.1.31 ec-3.6.1.31]
+
** [http://enzyme.expasy.org/EC/3.5.2.3 ec-3.5.2.3]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[PHOSPHORIBOSYL-ATP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PHOSPHORIBOSYL-AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 2 [[PROTON]][c]
+
* 1 [[DI-H-OROTATE]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[CARBAMYUL-L-ASPARTATE]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ07444]]
+
* Gene: [[SJ15949]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ17851]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ19150]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[HISTSYN-PWY]], L-histidine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=HISTSYN-PWY HISTSYN-PWY]
+
* [[PWY-5686]], UMP biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5686 PWY-5686]
−
** '''10''' reactions found over '''10''' reactions in the full pathway
+
** '''6''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7790]], UMP biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7790 PWY-7790]
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7791]], UMP biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7791 PWY-7791]
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22829 22829]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24299 24299]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04035 R04035]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01993 R01993]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P44434 P44434]
+
** [http://www.uniprot.org/uniprot/P08955 P08955]
−
** [http://www.uniprot.org/uniprot/Q9X0C5 Q9X0C5]
+
** [http://www.uniprot.org/uniprot/P27708 P27708]
−
** [http://www.uniprot.org/uniprot/Q9PM71 Q9PM71]
+
** [http://www.uniprot.org/uniprot/Q91437 Q91437]
−
** [http://www.uniprot.org/uniprot/Q02130 Q02130]
+
** [http://www.uniprot.org/uniprot/Q58885 Q58885]
−
** [http://www.uniprot.org/uniprot/Q9RWD6 Q9RWD6]
+
** [http://www.uniprot.org/uniprot/Q9PIN6 Q9PIN6]
−
** [http://www.uniprot.org/uniprot/Q9K0J4 Q9K0J4]
+
** [http://www.uniprot.org/uniprot/P25995 P25995]
−
** [http://www.uniprot.org/uniprot/O34912 O34912]
+
** [http://www.uniprot.org/uniprot/P20051 P20051]
−
** [http://www.uniprot.org/uniprot/P0A5B1 P0A5B1]
+
** [http://www.uniprot.org/uniprot/P06204 P06204]
−
** [http://www.uniprot.org/uniprot/Q9KSW7 Q9KSW7]
+
** [http://www.uniprot.org/uniprot/P05020 P05020]
−
** [http://www.uniprot.org/uniprot/Q9HUB6 Q9HUB6]
+
** [http://www.uniprot.org/uniprot/P31301 P31301]
−
** [http://www.uniprot.org/uniprot/Q57750 Q57750]
+
** [http://www.uniprot.org/uniprot/Q9PNA0 Q9PNA0]
−
** [http://www.uniprot.org/uniprot/O27344 O27344]
+
** [http://www.uniprot.org/uniprot/Q9JVD6 Q9JVD6]
−
** [http://www.uniprot.org/uniprot/Q9JVJ9 Q9JVJ9]
+
** [http://www.uniprot.org/uniprot/P46538 P46538]
−
** [http://www.uniprot.org/uniprot/O67780 O67780]
+
** [http://www.uniprot.org/uniprot/P20054 P20054]
−
** [http://www.uniprot.org/uniprot/Q9PBD1 Q9PBD1]
+
** [http://www.uniprot.org/uniprot/P05990 P05990]
−
** [http://www.uniprot.org/uniprot/P26722 P26722]
+
** [http://www.uniprot.org/uniprot/Q06950 Q06950]
−
** [http://www.uniprot.org/uniprot/P45353 P45353]
+
** [http://www.uniprot.org/uniprot/P72934 P72934]
−
** [http://www.uniprot.org/uniprot/Q12670 Q12670]
+
** [http://www.uniprot.org/uniprot/P74438 P74438]
−
** [http://www.uniprot.org/uniprot/P50935 P50935]
+
** [http://www.uniprot.org/uniprot/O04904 O04904]
−
** [http://www.uniprot.org/uniprot/P00815 P00815]
+
** [http://www.uniprot.org/uniprot/P72170 P72170]
−
** [http://www.uniprot.org/uniprot/P07685 P07685]
+
** [http://www.uniprot.org/uniprot/O76138 O76138]
−
** [http://www.uniprot.org/uniprot/O59667 O59667]
+
** [http://www.uniprot.org/uniprot/O27199 O27199]
−
** [http://www.uniprot.org/uniprot/O82768 O82768]
+
** [http://www.uniprot.org/uniprot/P48795 P48795]
−
** [http://www.uniprot.org/uniprot/P10367 P10367]
 
−
** [http://www.uniprot.org/uniprot/P06989 P06989]
 
 
</div>
 
</div>
−
{{#set: direction=left-to-right}}
+
{{#set: direction=reversible}}
−
{{#set: common-name=phosphoribosyl-atp pyrophosphatase}}
+
{{#set: common-name=dihydroorotase}}
−
{{#set: ec-number=ec-3.6.1.31}}
+
{{#set: ec-number=ec-3.5.2.3}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=3}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=3}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}

Revision as of 14:28, 26 August 2019

Reaction DIHYDROOROT-RXN

  • direction:
    • reversible
  • common-name:
    • dihydroorotase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5686, UMP biosynthesis I: PWY-5686
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-7790, UMP biosynthesis II: PWY-7790
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-7791, UMP biosynthesis III: PWY-7791
    • 5 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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