Difference between revisions of "RIBOFLAVINSYNREDUC-RXN"

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(Created page with "Category:reaction == Reaction 3-DEHYDROQUINATE-SYNTHASE-RXN == * direction: ** left-to-right * common-name: ** 3-dehydroquinate synthase * ec-number: ** [http://enzyme.exp...")
(Created page with "Category:reaction == Reaction RXN-2902 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.2.1 ec-1.2.1] == Reaction formula == * 1 CO-A[c]...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 3-DEHYDROQUINATE-SYNTHASE-RXN ==
+
== Reaction RXN-2902 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** 3-dehydroquinate synthase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.2.3.4 ec-4.2.3.4]
+
** [http://enzyme.expasy.org/EC/1.2.1 ec-1.2.1]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[3-DEOXY-D-ARABINO-HEPTULOSONATE-7-P]][c] '''=>''' 1 [[DEHYDROQUINATE]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[CO-A]][c] '''+''' 1 [[MALONATE-S-ALD]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADH]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ10493]]
+
* Gene: [[SJ00780]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ03966]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ10220]]
+
* Gene: [[SJ17249]]
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ15385]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6164]], 3-dehydroquinate biosynthesis I:
+
* [[BETA-ALA-DEGRADATION-I-PWY]], β-alanine degradation I:
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-7574]], propanoyl-CoA degradation II:
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[P562-PWY]], myo-inositol degradation I:
 +
** '''2''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-1781]], β-alanine degradation II:
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR101665
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21969 21969]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22993 22993]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03083 R03083]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00705 R00705]
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P07547 P07547]
 
−
** [http://www.uniprot.org/uniprot/P08566 P08566]
 
−
** [http://www.uniprot.org/uniprot/Q9CES8 Q9CES8]
 
−
** [http://www.uniprot.org/uniprot/Q9PNT2 Q9PNT2]
 
−
** [http://www.uniprot.org/uniprot/P43879 P43879]
 
−
** [http://www.uniprot.org/uniprot/Q9JVW5 Q9JVW5]
 
−
** [http://www.uniprot.org/uniprot/P0A4Z4 P0A4Z4]
 
−
** [http://www.uniprot.org/uniprot/P07639 P07639]
 
−
** [http://www.uniprot.org/uniprot/Q9P7R0 Q9P7R0]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=3-dehydroquinate synthase}}
+
{{#set: ec-number=ec-1.2.1}}
−
{{#set: ec-number=ec-4.2.3.4}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb gene associated=4}}
+
{{#set: nb pathway associated=4}}
−
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}

Revision as of 08:33, 15 March 2021

Reaction RXN-2902

  • direction:
    • left-to-right
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • BETA-ALA-DEGRADATION-I-PWY, β-alanine degradation I:
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7574, propanoyl-CoA degradation II:
    • 3 reactions found over 5 reactions in the full pathway
  • P562-PWY, myo-inositol degradation I:
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-1781, β-alanine degradation II:
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR101665
  • RHEA:
  • LIGAND-RXN:





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