Difference between revisions of "OAAAKGtm"
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(Created page with "Category:reaction == Reaction RXN-1826 == * direction: ** left-to-right * common-name: ** phosphorylase * ec-number: ** [http://enzyme.expasy.org/EC/2.4.1.1 ec-2.4.1.1] ==...") |
(Created page with "Category:reaction == Reaction 2.4.1.83-RXN == * direction: ** left-to-right * common-name: ** dolichol phosphate mannose synthase ** dolichyl-phosphate beta-d-mannosyltran...") |
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Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction RXN | + | == Reaction 2.4.1.83-RXN == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
− | ** | + | ** dolichol phosphate mannose synthase |
+ | ** dolichyl-phosphate beta-d-mannosyltransferase | ||
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/2.4.1. | + | ** [http://enzyme.expasy.org/EC/2.4.1.83 ec-2.4.1.83] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[DOLICHOLP]][c] '''+''' 1 [[GDP-MANNOSE]][c] '''=>''' 1 [[CPD-171]][c] '''+''' 1 [[GDP]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[SJ09824]] |
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ17231]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
+ | * [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation initial phase (eukaryotic): | ||
+ | ** '''16''' reactions found over '''19''' reactions in the full pathway | ||
+ | * [[PWY-7921]], protein O-mannosylation I (yeast): | ||
+ | ** '''2''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[PWY-7922]], protein O-mannosylation II (mammals, core M1 and core M2): | ||
+ | ** '''2''' reactions found over '''5''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
+ | * METANETX-RXN : MNXR115158 | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21185 21185] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R01009 R01009] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P14020 P14020] | ||
+ | ** [http://www.uniprot.org/uniprot/Q26732 Q26732] | ||
+ | ** [http://www.uniprot.org/uniprot/P54856 P54856] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9TYJ7 Q9TYJ7] | ||
+ | ** [http://www.uniprot.org/uniprot/O14466 O14466] | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: common-name= | + | {{#set: common-name=dolichyl-phosphate beta-d-mannosyltransferase|dolichol phosphate mannose synthase}} |
− | {{#set: ec-number=ec-2.4.1. | + | {{#set: ec-number=ec-2.4.1.83}} |
− | {{#set: nb gene associated= | + | {{#set: nb gene associated=2}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=3}} |
− | {{#set: reconstruction category=annotation}} | + | {{#set: reconstruction category=orthology|annotation}} |
− | {{#set: reconstruction tool=pathwaytools}} | + | {{#set: reconstruction tool=pantograph|pathwaytools}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=saccharina_japonica_genome}} | + | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}} |
Revision as of 08:35, 15 March 2021
Contents
Reaction 2.4.1.83-RXN
- direction:
- left-to-right
- common-name:
- dolichol phosphate mannose synthase
- dolichyl-phosphate beta-d-mannosyltransferase
- ec-number:
Reaction formula
- 1 DOLICHOLP[c] + 1 GDP-MANNOSE[c] => 1 CPD-171[c] + 1 GDP[c]
Gene(s) associated with this reaction
- Gene: SJ09824
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ17231
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
Pathway(s)
- MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS, protein N-glycosylation initial phase (eukaryotic):
- 16 reactions found over 19 reactions in the full pathway
- PWY-7921, protein O-mannosylation I (yeast):
- 2 reactions found over 7 reactions in the full pathway
- PWY-7922, protein O-mannosylation II (mammals, core M1 and core M2):
- 2 reactions found over 5 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
- METANETX-RXN : MNXR115158
- RHEA:
- LIGAND-RXN:
- UNIPROT: