Difference between revisions of "RXN-15556"
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(Created page with "Category:reaction == Reaction RXN-10817 == * direction: ** left-to-right * common-name: ** phenylethylamine oxidase * ec-number: ** [http://enzyme.expasy.org/EC/1.4.3.4 ec...") |
(Created page with "Category:reaction == Reaction DIHYDRODIPICSYN-RXN == * direction: ** left-to-right * common-name: ** 4-hydroxy-tetrahydrodipicolinate synthase * ec-number: ** [http://enzy...") |
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Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction RXN | + | == Reaction DIHYDRODIPICSYN-RXN == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
− | ** | + | ** 4-hydroxy-tetrahydrodipicolinate synthase |
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/4.3.3.7 ec-4.3.3.7] |
+ | * synonymous: | ||
+ | ** dihydrodipicolinic acid synthase | ||
+ | ** dihydropicolinate synthetase | ||
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[L-ASPARTATE-SEMIALDEHYDE]][c] '''+''' 1 [[PYRUVATE]][c] '''=>''' 1 [[CPD-14443]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[SJ18863]] |
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[SJ21231]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
− | * [[PWY- | + | * [[PWY-5097]], L-lysine biosynthesis VI: |
− | ** ''' | + | ** '''7''' reactions found over '''7''' reactions in the full pathway |
+ | * [[DAPLYSINESYN-PWY]], L-lysine biosynthesis I: | ||
+ | ** '''7''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[PWY-2941]], L-lysine biosynthesis II: | ||
+ | ** '''6''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[PWY-2942]], L-lysine biosynthesis III: | ||
+ | ** '''6''' reactions found over '''7''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
+ | * METANETX-RXN : MNXR113514 | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R10147 R10147] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P43797 P43797] | ||
+ | ** [http://www.uniprot.org/uniprot/O26892 O26892] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9Z6K9 Q9Z6K9] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9X1K9 Q9X1K9] | ||
+ | ** [http://www.uniprot.org/uniprot/P19808 P19808] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9ZM13 Q9ZM13] | ||
+ | ** [http://www.uniprot.org/uniprot/O05969 O05969] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9CF61 Q9CF61] | ||
+ | ** [http://www.uniprot.org/uniprot/Q04796 Q04796] | ||
+ | ** [http://www.uniprot.org/uniprot/Q57695 Q57695] | ||
+ | ** [http://www.uniprot.org/uniprot/O25657 O25657] | ||
+ | ** [http://www.uniprot.org/uniprot/O67216 O67216] | ||
+ | ** [http://www.uniprot.org/uniprot/O29352 O29352] | ||
+ | ** [http://www.uniprot.org/uniprot/O84366 O84366] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PPB4 Q9PPB4] | ||
+ | ** [http://www.uniprot.org/uniprot/P63945 P63945] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JUU9 Q9JUU9] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9LZX6 Q9LZX6] | ||
+ | ** [http://www.uniprot.org/uniprot/Q43038 Q43038] | ||
+ | ** [http://www.uniprot.org/uniprot/P49423 P49423] | ||
+ | ** [http://www.uniprot.org/uniprot/Q55513 Q55513] | ||
+ | ** [http://www.uniprot.org/uniprot/P0A6L2 P0A6L2] | ||
+ | ** [http://www.uniprot.org/uniprot/Q42948 Q42948] | ||
+ | ** [http://www.uniprot.org/uniprot/Q42940 Q42940] | ||
+ | ** [http://www.uniprot.org/uniprot/O86841 O86841] | ||
+ | ** [http://www.uniprot.org/uniprot/P24847 P24847] | ||
+ | ** [http://www.uniprot.org/uniprot/P24846 P24846] | ||
+ | </div> | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: common-name= | + | {{#set: common-name=4-hydroxy-tetrahydrodipicolinate synthase}} |
− | {{#set: ec-number=ec- | + | {{#set: ec-number=ec-4.3.3.7}} |
− | {{#set: nb gene associated= | + | {{#set: synonymous=dihydrodipicolinic acid synthase|dihydropicolinate synthetase}} |
− | {{#set: nb pathway associated= | + | {{#set: nb gene associated=2}} |
+ | {{#set: nb pathway associated=4}} | ||
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
{{#set: reconstruction source=saccharina_japonica_genome}} | {{#set: reconstruction source=saccharina_japonica_genome}} |
Revision as of 08:39, 15 March 2021
Contents
Reaction DIHYDRODIPICSYN-RXN
- direction:
- left-to-right
- common-name:
- 4-hydroxy-tetrahydrodipicolinate synthase
- ec-number:
- synonymous:
- dihydrodipicolinic acid synthase
- dihydropicolinate synthetase
Reaction formula
- 1 L-ASPARTATE-SEMIALDEHYDE[c] + 1 PYRUVATE[c] => 1 CPD-14443[c] + 1 PROTON[c] + 1 WATER[c]
Gene(s) associated with this reaction
- Gene: SJ18863
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ21231
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-5097, L-lysine biosynthesis VI:
- 7 reactions found over 7 reactions in the full pathway
- DAPLYSINESYN-PWY, L-lysine biosynthesis I:
- 7 reactions found over 9 reactions in the full pathway
- PWY-2941, L-lysine biosynthesis II:
- 6 reactions found over 9 reactions in the full pathway
- PWY-2942, L-lysine biosynthesis III:
- 6 reactions found over 7 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links