Difference between revisions of "SJ10005"

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(Created page with "Category:gene == Gene SJ10661 == * transcription-direction: ** positive * right-end-position: ** 110818 * left-end-position: ** 96057 * centisome-position: ** 12.188396...")
(Created page with "Category:gene == Gene SJ10005 == * transcription-direction: ** positive * right-end-position: ** 105908 * left-end-position: ** 89266 * centisome-position: ** 22.332468...")
 
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
== Gene SJ10661 ==
+
== Gene SJ10005 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
** 110818
+
** 105908
 
* left-end-position:
 
* left-end-position:
** 96057
+
** 89266
 
* centisome-position:
 
* centisome-position:
** 12.188396    
+
** 22.332468    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PHENYLALANINE--TRNA-LIGASE-RXN]]
* [[1.8.1.4-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[PYRNUTRANSHYDROGEN-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* [[RXN-7716]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-7719]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-8629]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN0-1132]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[PWY-5083]]
+
* [[TRNA-CHARGING-PWY]]
** '''5''' reactions found over '''6''' reactions in the full pathway
+
** '''21''' reactions found over '''21''' reactions in the full pathway
* [[PWY-5084]]
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-5046]]
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
* [[GLYCLEAV-PWY]]
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
* [[PYRUVDEHYD-PWY]]
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
{{#set: right-end-position=110818}}
+
{{#set: right-end-position=105908}}
{{#set: left-end-position=96057}}
+
{{#set: left-end-position=89266}}
{{#set: centisome-position=12.188396   }}
+
{{#set: centisome-position=22.332468   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=1}}
{{#set: nb pathway associated=5}}
+
{{#set: nb pathway associated=1}}

Latest revision as of 11:04, 18 March 2021

Gene SJ10005

  • transcription-direction:
    • positive
  • right-end-position:
    • 105908
  • left-end-position:
    • 89266
  • centisome-position:
    • 22.332468

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated