Difference between revisions of "SJ14668"

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(Created page with "Category:gene == Gene SJ13532 == * transcription-direction: ** negative * right-end-position: ** 324930 * left-end-position: ** 315714 * centisome-position: ** 94.46915...")
(Created page with "Category:gene == Gene SJ14668 == * transcription-direction: ** negative * right-end-position: ** 142204 * left-end-position: ** 120668 * centisome-position: ** 38.84509...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ13532 ==
+
== Gene SJ14668 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 324930
+
** 142204
 
* left-end-position:
 
* left-end-position:
−
** 315714
+
** 120668
 
* centisome-position:
 
* centisome-position:
−
** 94.46915    
+
** 38.84509    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PEPCARBOXYKIN-RXN]]
−
* [[FARNESYLTRANSTRANSFERASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[GPPSYN-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[IPPISOM-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-12263]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-13162]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-13724]]
 
−
** Category: [[orthology]]
 
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN66-281]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-7117]]
−
* [[PWY-7492]]
+
** '''10''' reactions found over '''14''' reactions in the full pathway
−
** '''1''' reactions found over '''6''' reactions in the full pathway
+
* [[PWY-561]]
−
* [[PWY-6659]]
+
** '''6''' reactions found over '''4''' reactions in the full pathway
−
** '''1''' reactions found over '''8''' reactions in the full pathway
+
* [[GLUCONEO-PWY]]
−
* [[PWY-7517]]
+
** '''12''' reactions found over '''13''' reactions in the full pathway
−
** '''1''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-6691]]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7721]]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7736]]
 
−
** '''3''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-5120]]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY-7720]]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6383]]
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7410]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7102]]
 
−
** '''3''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-6859]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5122]]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY-7141]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-7659]]
 
−
** '''1''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-7709]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-5123]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7182]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[NONMEVIPP-PWY]]
 
−
** '''9''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-6174]]
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-7560]]
 
−
** '''9''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-7524]]
 
−
** '''5''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-7391]]
 
−
** '''7''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-922]]
 
−
** '''7''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-6105]]
 
−
** '''2''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-5875]]
 
−
** '''1''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-6767]]
 
−
** '''1''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-7072]]
 
−
** '''1''' reactions found over '''14''' reactions in the full pathway
 
−
* [[PWY-5670]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
</div>
 
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=324930}}
+
{{#set: right-end-position=142204}}
−
{{#set: left-end-position=315714}}
+
{{#set: left-end-position=120668}}
−
{{#set: centisome-position=94.46915   }}
+
{{#set: centisome-position=38.84509   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=7}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=29}}
+
{{#set: nb pathway associated=3}}

Latest revision as of 11:09, 18 March 2021

Gene SJ14668

  • transcription-direction:
    • negative
  • right-end-position:
    • 142204
  • left-end-position:
    • 120668
  • centisome-position:
    • 38.84509

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7117
    • 10 reactions found over 14 reactions in the full pathway
  • PWY-561
    • 6 reactions found over 4 reactions in the full pathway
  • GLUCONEO-PWY
    • 12 reactions found over 13 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ14668&oldid=135776"