Difference between revisions of "SJ11913"

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(Created page with "Category:gene == Gene SJ16156 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * 3PGAREARR-RXN ** Categ...")
(Created page with "Category:gene == Gene SJ11913 == * transcription-direction: ** positive * right-end-position: ** 389858 * left-end-position: ** 374707 * centisome-position: ** 48.454765...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ16156 ==
+
== Gene SJ11913 ==
 +
* transcription-direction:
 +
** positive
 +
* right-end-position:
 +
** 389858
 +
* left-end-position:
 +
** 374707
 +
* centisome-position:
 +
** 48.454765   
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[3PGAREARR-RXN]]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[G6PADH]]
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** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[G6PADHh]]
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** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[G6PBDH]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[G6PBDHh]]
 +
** Category: [[orthology]]
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[GLU6PDEHYDROG-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-14819]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-7268]]
−
* [[PWY-6142]]
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** '''4''' reactions found over '''5''' reactions in the full pathway
−
** '''10''' reactions found over '''13''' reactions in the full pathway
+
* [[P122-PWY]]
−
* [[PWY-7003]]
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** '''16''' reactions found over '''18''' reactions in the full pathway
−
** '''8''' reactions found over '''6''' reactions in the full pathway
+
* [[GLYCOLYSIS-E-D]]
−
* [[PWY-7218]]
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** '''4''' reactions found over '''2''' reactions in the full pathway
−
** '''7''' reactions found over '''4''' reactions in the full pathway
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* [[OXIDATIVEPENT-PWY]]
−
* [[GLYCOLYSIS]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
−
** '''11''' reactions found over '''12''' reactions in the full pathway
+
* [[RUMP-PWY]]
−
* [[P341-PWY]]
+
** '''4''' reactions found over '''6''' reactions in the full pathway
−
** '''6''' reactions found over '''10''' reactions in the full pathway
+
{{#set: transcription-direction=positive}}
−
* [[PWY-5723]]
+
{{#set: right-end-position=389858}}
−
** '''10''' reactions found over '''10''' reactions in the full pathway
+
{{#set: left-end-position=374707}}
−
* [[P124-PWY]]
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{{#set: centisome-position=48.454765    }}
−
** '''12''' reactions found over '''15''' reactions in the full pathway
 
−
* [[PWY-2221]]
 
−
** '''6''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-5484]]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-1042]]
 
−
** '''9''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-6886]]
 
−
** '''8''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6901]]
 
−
** '''10''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-7124]]
 
−
** '''8''' reactions found over '''8''' reactions in the full pathway
 
−
* [[GLUCONEO-PWY]]
 
−
** '''12''' reactions found over '''13''' reactions in the full pathway
 
−
</div>
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=6}}
−
{{#set: nb pathway associated=14}}
+
{{#set: nb pathway associated=5}}

Latest revision as of 11:10, 18 March 2021

Gene SJ11913

  • transcription-direction:
    • positive
  • right-end-position:
    • 389858
  • left-end-position:
    • 374707
  • centisome-position:
    • 48.454765

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7268
    • 4 reactions found over 5 reactions in the full pathway
  • P122-PWY
    • 16 reactions found over 18 reactions in the full pathway
  • GLYCOLYSIS-E-D
    • 4 reactions found over 2 reactions in the full pathway
  • OXIDATIVEPENT-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • RUMP-PWY
    • 4 reactions found over 6 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ11913&oldid=136351"