Difference between revisions of "2.7.9.3-RXN"

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(Created page with "Category:reaction == Reaction ALANINE-AMINOTRANSFERASE-RXN == * direction: ** reversible * common-name: ** glutamate-pyruvate aminotransferase * ec-number: ** [http://enzy...")
(Created page with "Category:reaction == Reaction 2.7.9.3-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.7.9.3 ec-2.7.9.3] == Reaction formula == * 1 AT...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ALANINE-AMINOTRANSFERASE-RXN ==
+
== Reaction 2.7.9.3-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
−
* common-name:
 
−
** glutamate-pyruvate aminotransferase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.6.1.2 ec-2.6.1.2]
+
** [http://enzyme.expasy.org/EC/2.7.9.3 ec-2.7.9.3]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[L-ALPHA-ALANINE]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[PYRUVATE]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[SE-2]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[SEPO3]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ06815]]
+
* Gene: [[SJ08249]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ19809]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7383]], anaerobic energy metabolism (invertebrates, cytosol):
+
* [[PWY0-901]], L-selenocysteine biosynthesis I (bacteria):
−
** '''4''' reactions found over '''7''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[ALANINE-SYN2-PWY]], L-alanine biosynthesis II:
+
* [[PWY-6281]], L-selenocysteine biosynthesis II (archaea and eukaryotes):
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[ALANINE-DEG3-PWY]], L-alanine degradation III:
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[ALACAT2-PWY]], L-alanine degradation II (to D-lactate):
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type:
 
−
** '''10''' reactions found over '''14''' reactions in the full pathway
 
−
* [[PWY-7115]], C4 photosynthetic carbon assimilation cycle, NAD-ME type:
 
−
** '''9''' reactions found over '''11''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR104322
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19456 19456]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18738 18738]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00258 R00258]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03595 R03595]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P13191 P13191]
+
** [http://www.uniprot.org/uniprot/Q9PMF9 Q9PMF9]
−
** [http://www.uniprot.org/uniprot/P25409 P25409]
+
{{#set: direction=left-to-right}}
−
** [http://www.uniprot.org/uniprot/P24298 P24298]
+
{{#set: ec-number=ec-2.7.9.3}}
−
** [http://www.uniprot.org/uniprot/Q9UR81 Q9UR81]
+
{{#set: nb gene associated=1}}
−
** [http://www.uniprot.org/uniprot/P34106 P34106]
+
{{#set: nb pathway associated=2}}
−
** [http://www.uniprot.org/uniprot/P52894 P52894]
+
{{#set: reconstruction category=orthology}}
−
** [http://www.uniprot.org/uniprot/Q42685 Q42685]
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=glutamate-pyruvate aminotransferase}}
 
−
{{#set: ec-number=ec-2.6.1.2}}
 
−
{{#set: nb gene associated=2}}
 
−
{{#set: nb pathway associated=6}}
 
−
{{#set: reconstruction category=orthology|annotation}}
 
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}

Latest revision as of 11:19, 18 March 2021

Reaction 2.7.9.3-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY0-901, L-selenocysteine biosynthesis I (bacteria):
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-6281, L-selenocysteine biosynthesis II (archaea and eukaryotes):
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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