Difference between revisions of "SJ17943"

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(Created page with "Category:gene == Gene SJ19063 == * transcription-direction: ** positive * right-end-position: ** 162150 * left-end-position: ** 136755 * centisome-position: ** 58.97205...")
(Created page with "Category:gene == Gene SJ13464 == * transcription-direction: ** negative * right-end-position: ** 654012 * left-end-position: ** 634746 * centisome-position: ** 87.11978...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ19063 ==
+
== Gene SJ13464 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 162150
+
** 654012
 
* left-end-position:
 
* left-end-position:
−
** 136755
+
** 634746
 
* centisome-position:
 
* centisome-position:
−
** 58.97205    
+
** 87.11978    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RXN-13729]]
+
* [[ATPASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
−
* [[RXN3DJ-11230]]
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-11109]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[SGPL11]]
+
* [[RXN-12195]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[SPHINGANINE-1-PHOSPHATE-ALDOLASE-RXN]]
+
* [[RXN-12196]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-5462]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7119]]
+
* [[PWY-7210]]
−
** '''4''' reactions found over '''11''' reactions in the full pathway
+
** '''8''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY3DJ-11470]]
+
* [[PWY-7198]]
−
** '''3''' reactions found over '''8''' reactions in the full pathway
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[PWY-7184]]
−
{{#set: right-end-position=162150}}
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
{{#set: left-end-position=136755}}
+
* [[PWY-6545]]
−
{{#set: centisome-position=58.97205   }}
+
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=654012}}
 +
{{#set: left-end-position=634746}}
 +
{{#set: centisome-position=87.11978   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=6}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=4}}

Revision as of 09:25, 27 August 2019

Gene SJ13464

  • transcription-direction:
    • negative
  • right-end-position:
    • 654012
  • left-end-position:
    • 634746
  • centisome-position:
    • 87.11978

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway




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