Difference between revisions of "SJ02183"

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(Created page with "Category:gene == Gene SJ05251 == * transcription-direction: ** negative * right-end-position: ** 304186 * left-end-position: ** 294677 * centisome-position: ** 59.076946...")
(Created page with "Category:gene == Gene SJ16170 == * transcription-direction: ** positive * right-end-position: ** 81495 * left-end-position: ** 78421 * centisome-position: ** 27.358994...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ05251 ==
+
== Gene SJ16170 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 304186
+
** 81495
 
* left-end-position:
 
* left-end-position:
−
** 294677
+
** 78421
 
* centisome-position:
 
* centisome-position:
−
** 59.076946    
+
** 27.358994    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[GAPDH_]]
+
* [[RXN-16889]]
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[GAPOXNPHOSPHN-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-16891]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
−
== Pathway(s) associated ==
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[RXN-17121]]
−
* [[GLUCONEO-PWY]]
+
** Category: [[annotation]]
−
** '''12''' reactions found over '''13''' reactions in the full pathway
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[P124-PWY]]
+
{{#set: transcription-direction=positive}}
−
** '''12''' reactions found over '''15''' reactions in the full pathway
+
{{#set: right-end-position=81495}}
−
* [[P185-PWY]]
+
{{#set: left-end-position=78421}}
−
** '''11''' reactions found over '''12''' reactions in the full pathway
+
{{#set: centisome-position=27.358994   }}
−
* [[P122-PWY]]
 
−
** '''16''' reactions found over '''18''' reactions in the full pathway
 
−
* [[PWY-5484]]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-1042]]
 
−
** '''9''' reactions found over '''10''' reactions in the full pathway
 
−
* [[GLYCOLYSIS]]
 
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[ANAGLYCOLYSIS-PWY]]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[SUCSYN-PWY]]
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY66-399]]
 
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-6901]]
 
−
** '''10''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-7003]]
 
−
** '''8''' reactions found over '''6''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=304186}}
 
−
{{#set: left-end-position=294677}}
 
−
{{#set: centisome-position=59.076946   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=12}}
 

Revision as of 09:26, 27 August 2019

Gene SJ16170

  • transcription-direction:
    • positive
  • right-end-position:
    • 81495
  • left-end-position:
    • 78421
  • centisome-position:
    • 27.358994

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ02183&oldid=31278"