Difference between revisions of "SJ14691"

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(Created page with "Category:gene == Gene SJ15746 == * transcription-direction: ** negative * right-end-position: ** 158536 * left-end-position: ** 147158 * centisome-position: ** 12.087544...")
(Created page with "Category:gene == Gene SJ01234 == * transcription-direction: ** negative * right-end-position: ** 248214 * left-end-position: ** 236690 * centisome-position: ** 42.771072...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ15746 ==
+
== Gene SJ01234 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 158536
+
** 248214
 
* left-end-position:
 
* left-end-position:
−
** 147158
+
** 236690
 
* centisome-position:
 
* centisome-position:
−
** 12.087544    
+
** 42.771072    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[MALATE-DEH-RXN]]
+
* [[GPPSYN-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-14929]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-2541]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[PWY-6969]]
+
* [[PWY-6383]]
−
** '''10''' reactions found over '''12''' reactions in the full pathway
+
** '''2''' reactions found over '''5''' reactions in the full pathway
−
* [[P23-PWY]]
+
* [[PWY-7410]]
−
** '''9''' reactions found over '''12''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
* [[FERMENTATION-PWY]]
+
* [[PWY-7102]]
−
** '''11''' reactions found over '''16''' reactions in the full pathway
+
** '''3''' reactions found over '''6''' reactions in the full pathway
−
* [[GLYOXYLATE-BYPASS]]
+
* [[PWY-6859]]
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
* [[GLUCONEO-PWY]]
+
* [[PWY-7736]]
−
** '''12''' reactions found over '''13''' reactions in the full pathway
+
** '''3''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-1622]]
+
* [[PWY-5122]]
−
** '''6''' reactions found over '''13''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY-7383]]
+
* [[PWY-7141]]
−
** '''4''' reactions found over '''7''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[P42-PWY]]
+
* [[PWY-7659]]
 +
** '''1''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7709]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-5123]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7182]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-7436]]
 +
** '''4''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-1422]]
 
** '''5''' reactions found over '''7''' reactions in the full pathway
 
** '''5''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-5392]]
 
−
** '''6''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-5690]]
 
−
** '''8''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-7115]]
 
−
** '''9''' reactions found over '''10''' reactions in the full pathway
 
−
* [[TCA]]
 
−
** '''9''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-561]]
 
−
** '''6''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5913]]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-6728]]
 
−
** '''11''' reactions found over '''19''' reactions in the full pathway
 
−
* [[P105-PWY]]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY66-398]]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[P108-PWY]]
 
−
** '''2''' reactions found over '''7''' reactions in the full pathway
 
−
* [[MALATE-ASPARTATE-SHUTTLE-PWY]]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY66-399]]
 
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
 
</div>
 
</div>
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=158536}}
+
{{#set: right-end-position=248214}}
−
{{#set: left-end-position=147158}}
+
{{#set: left-end-position=236690}}
−
{{#set: centisome-position=12.087544   }}
+
{{#set: centisome-position=42.771072   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=20}}
+
{{#set: nb pathway associated=13}}

Revision as of 09:27, 27 August 2019

Gene SJ01234

  • transcription-direction:
    • negative
  • right-end-position:
    • 248214
  • left-end-position:
    • 236690
  • centisome-position:
    • 42.771072

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6383
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-7410
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-7102
    • 3 reactions found over 6 reactions in the full pathway
  • PWY-6859
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7736
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-5122
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-7141
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7659
    • 1 reactions found over 9 reactions in the full pathway
  • PWY-7709
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-5123
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7182
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7436
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-1422
    • 5 reactions found over 7 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ14691&oldid=31905"