Difference between revisions of "SJ06544"
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(Created page with "Category:gene == Gene SJ01588 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * 4.2.2.10-RXN ** Catego...") |
(Created page with "Category:gene == Gene SJ15468 == * transcription-direction: ** positive * right-end-position: ** 55097 * left-end-position: ** 52617 * centisome-position: ** 17.805489...") |
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Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ15468 == |
+ | * transcription-direction: | ||
+ | ** positive | ||
+ | * right-end-position: | ||
+ | ** 55097 | ||
+ | * left-end-position: | ||
+ | ** 52617 | ||
+ | * centisome-position: | ||
+ | ** 17.805489 | ||
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[4. | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
+ | * [[4.3.1.17-RXN]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[5.1.1.18-RXN]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[AMINO-ACID-RACEMASE-RXN]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[DSERDEAM-RXN]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-15125]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-15581]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN0-2381]] | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
− | * [[ | + | * [[RXN0-2382]] |
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | * [[TRYPSYN-RXN]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | </div> | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
− | * [[PWY- | + | * [[PWY-6196]] |
− | ** '''1''' reactions found over ''' | + | ** '''2''' reactions found over '''1''' reactions in the full pathway |
+ | * [[PWY-6455]] | ||
+ | ** '''1''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[SERDEG-PWY]] | ||
+ | ** '''1''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-5497]] | ||
+ | ** '''10''' reactions found over '''24''' reactions in the full pathway | ||
+ | * [[PWY-3661]] | ||
+ | ** '''3''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[PWY0-1535]] | ||
+ | ** '''1''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[TRPSYN-PWY]] | ||
+ | ** '''6''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PWY-6949]] | ||
+ | ** '''1''' reactions found over '''6''' reactions in the full pathway | ||
+ | {{#set: transcription-direction=positive}} | ||
+ | {{#set: right-end-position=55097}} | ||
+ | {{#set: left-end-position=52617}} | ||
+ | {{#set: centisome-position=17.805489 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=9}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=8}} |
Revision as of 09:27, 27 August 2019
Contents
Gene SJ15468
- transcription-direction:
- positive
- right-end-position:
- 55097
- left-end-position:
- 52617
- centisome-position:
- 17.805489
Organism(s) associated with this gene
Reaction(s) associated
- 4.3.1.17-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- 5.1.1.18-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- AMINO-ACID-RACEMASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- DSERDEAM-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-15125
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-15581
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN0-2381
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- RXN0-2382
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- TRYPSYN-RXN
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
Pathway(s) associated
- PWY-6196
- 2 reactions found over 1 reactions in the full pathway
- PWY-6455
- 1 reactions found over 3 reactions in the full pathway
- SERDEG-PWY
- 1 reactions found over 3 reactions in the full pathway
- PWY-5497
- 10 reactions found over 24 reactions in the full pathway
- PWY-3661
- 3 reactions found over 7 reactions in the full pathway
- PWY0-1535
- 1 reactions found over 3 reactions in the full pathway
- TRPSYN-PWY
- 6 reactions found over 6 reactions in the full pathway
- PWY-6949
- 1 reactions found over 6 reactions in the full pathway