Difference between revisions of "SJ20709"

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(Created page with "Category:gene == Gene SJ05204 == * transcription-direction: ** positive * right-end-position: ** 422188 * left-end-position: ** 407914 * centisome-position: ** 81.49332...")
(Created page with "Category:gene == Gene SJ07523 == * transcription-direction: ** positive * right-end-position: ** 24046 * left-end-position: ** 8197 * centisome-position: ** 12.457826...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ05204 ==
+
== Gene SJ07523 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 422188
+
** 24046
 
* left-end-position:
 
* left-end-position:
−
** 407914
+
** 8197
 
* centisome-position:
 
* centisome-position:
−
** 81.49332    
+
** 12.457826    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[GAPOXNPHOSPHN-RXN]]
+
* [[FORMATETHFLIG-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[FTHFL]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-2161]]
−
* [[GLUCONEO-PWY]]
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
** '''12''' reactions found over '''13''' reactions in the full pathway
+
* [[PWY-2201]]
−
* [[P124-PWY]]
+
** '''9''' reactions found over '''12''' reactions in the full pathway
−
** '''12''' reactions found over '''15''' reactions in the full pathway
+
* [[PWY-1722]]
−
* [[P185-PWY]]
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
** '''11''' reactions found over '''12''' reactions in the full pathway
+
* [[CODH-PWY]]
−
* [[P122-PWY]]
+
** '''4''' reactions found over '''9''' reactions in the full pathway
−
** '''16''' reactions found over '''18''' reactions in the full pathway
+
* [[PWY-3841]]
−
* [[PWY-5484]]
+
** '''9''' reactions found over '''11''' reactions in the full pathway
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-1042]]
 
−
** '''9''' reactions found over '''10''' reactions in the full pathway
 
−
* [[GLYCOLYSIS]]
 
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[ANAGLYCOLYSIS-PWY]]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[SUCSYN-PWY]]
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY66-399]]
 
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-6901]]
 
−
** '''10''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-7003]]
 
−
** '''8''' reactions found over '''6''' reactions in the full pathway
 
−
</div>
 
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=422188}}
+
{{#set: right-end-position=24046}}
−
{{#set: left-end-position=407914}}
+
{{#set: left-end-position=8197}}
−
{{#set: centisome-position=81.49332   }}
+
{{#set: centisome-position=12.457826   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=12}}
+
{{#set: nb pathway associated=5}}

Revision as of 09:27, 27 August 2019

Gene SJ07523

  • transcription-direction:
    • positive
  • right-end-position:
    • 24046
  • left-end-position:
    • 8197
  • centisome-position:
    • 12.457826

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-2161
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-2201
    • 9 reactions found over 12 reactions in the full pathway
  • PWY-1722
    • 3 reactions found over 3 reactions in the full pathway
  • CODH-PWY
    • 4 reactions found over 9 reactions in the full pathway
  • PWY-3841
    • 9 reactions found over 11 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ20709&oldid=32084"