Difference between revisions of "HSCN"

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(Created page with "Category:gene == Gene SJ10351 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * TRIOSEPISOMERIZATION-RXN...")
(Created page with "Category:gene == Gene SJ01604 == * transcription-direction: ** positive * right-end-position: ** 13911 * left-end-position: ** 5145 * centisome-position: ** 3.479243 =...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ10351 ==
+
== Gene SJ01604 ==
 +
* transcription-direction:
 +
** positive
 +
* right-end-position:
 +
** 13911
 +
* left-end-position:
 +
** 5145
 +
* centisome-position:
 +
** 3.479243   
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[TRIOSEPISOMERIZATION-RXN]]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[3.4.11.18-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-17873]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17874]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17875]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17876]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17877]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17878]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-7800]]
−
* [[GLUCONEO-PWY]]
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** '''6''' reactions found over '''21''' reactions in the full pathway
−
** '''12''' reactions found over '''13''' reactions in the full pathway
+
* [[PWY-7799]]
−
* [[CALVIN-PWY]]
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** '''7''' reactions found over '''14''' reactions in the full pathway
−
** '''12''' reactions found over '''13''' reactions in the full pathway
+
{{#set: transcription-direction=positive}}
−
* [[P185-PWY]]
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{{#set: right-end-position=13911}}
−
** '''11''' reactions found over '''12''' reactions in the full pathway
+
{{#set: left-end-position=5145}}
−
* [[PWY-5484]]
+
{{#set: centisome-position=3.479243    }}
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-1042]]
 
−
** '''9''' reactions found over '''10''' reactions in the full pathway
 
−
* [[P341-PWY]]
 
−
** '''6''' reactions found over '''10''' reactions in the full pathway
 
−
* [[GLYCOLYSIS]]
 
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[ANAGLYCOLYSIS-PWY]]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY66-399]]
 
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-6142]]
 
−
** '''10''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY66-373]]
 
−
** '''3''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7003]]
 
−
** '''8''' reactions found over '''6''' reactions in the full pathway
 
−
</div>
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=7}}
−
{{#set: nb pathway associated=12}}
+
{{#set: nb pathway associated=2}}

Revision as of 09:28, 27 August 2019

Gene SJ01604

  • transcription-direction:
    • positive
  • right-end-position:
    • 13911
  • left-end-position:
    • 5145
  • centisome-position:
    • 3.479243

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7800
    • 6 reactions found over 21 reactions in the full pathway
  • PWY-7799
    • 7 reactions found over 14 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=HSCN&oldid=33579"