Difference between revisions of "Phosphoserines"

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(Created page with "Category:gene == Gene SJ09694 == * transcription-direction: ** negative * right-end-position: ** 21027 * left-end-position: ** 15741 * centisome-position: ** 42.13668...")
(Created page with "Category:gene == Gene SJ07066 == * transcription-direction: ** positive * right-end-position: ** 180256 * left-end-position: ** 177130 * centisome-position: ** 38.146286...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ09694 ==
+
== Gene SJ07066 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 21027
+
** 180256
 
* left-end-position:
 
* left-end-position:
−
** 15741
+
** 177130
 
* centisome-position:
 
* centisome-position:
−
** 42.13668    
+
** 38.146286    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RXN-11783]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[DOLICHYLDIPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-11989]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-11999]]
+
* [[PHOSPHATIDATE-PHOSPHATASE-RXN]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-16030]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-16121]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17730]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6681]]
+
* [[TRIGLSYN-PWY]]
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6453]]
 
** '''3''' reactions found over '''7''' reactions in the full pathway
 
** '''3''' reactions found over '''7''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
* [[PWY-7782]]
−
{{#set: right-end-position=21027}}
+
** '''11''' reactions found over '''16''' reactions in the full pathway
−
{{#set: left-end-position=15741}}
+
{{#set: transcription-direction=positive}}
−
{{#set: centisome-position=42.13668   }}
+
{{#set: right-end-position=180256}}
 +
{{#set: left-end-position=177130}}
 +
{{#set: centisome-position=38.146286   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=6}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=3}}

Revision as of 09:28, 27 August 2019

Gene SJ07066

  • transcription-direction:
    • positive
  • right-end-position:
    • 180256
  • left-end-position:
    • 177130
  • centisome-position:
    • 38.146286

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • TRIGLSYN-PWY
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-6453
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-7782
    • 11 reactions found over 16 reactions in the full pathway




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