Difference between revisions of "Heparan-NAc-Glc"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.27.9-RXN 3.1.27.9-RXN] == * direction: ** left-to-right * common-name: ** trna-splicing endonuc...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ORNITHINE--OXO-ACID-AMINOTRANSFERASE-RXN ORNITHINE--OXO-ACID-AMINOTRANSFERASE-RXN] == * direction:...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.27.9-RXN 3.1.27.9-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ORNITHINE--OXO-ACID-AMINOTRANSFERASE-RXN ORNITHINE--OXO-ACID-AMINOTRANSFERASE-RXN] ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** trna-splicing endonuclease subunit sen2
+
** ornithine aminotransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.6.1.16 ec-4.6.1.16]
+
** [http://enzyme.expasy.org/EC/2.6.1.13 ec-2.6.1.13]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD0-2350]][c] '''=>''' 1 [[Pre-tRNA-3-prime-half-molecules]][c] '''+''' 1 [[Pre-tRNA-5-prime-half-molecules]][c] '''+''' 1 [[tRNA-Introns]][c]
+
* 1 [[2-Oxo-carboxylates]][c] '''+''' 1 [[L-ORNITHINE]][c] '''<=>''' 1 [[Amino-Acids-20]][c] '''+''' 1 [[L-GLUTAMATE_GAMMA-SEMIALDEHYDE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ20336]]
+
* Gene: [[SJ09475]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ00058]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7803]], tRNA splicing II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7803 PWY-7803]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-6689]], tRNA splicing I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6689 PWY-6689]
 
−
** '''2''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13880 13880]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01343 R01343]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/O07118 O07118]
+
** [http://www.uniprot.org/uniprot/P31893 P31893]
−
{{#set: direction=left-to-right}}
+
** [http://www.uniprot.org/uniprot/P38021 P38021]
−
{{#set: common-name=trna-splicing endonuclease subunit sen2}}
+
** [http://www.uniprot.org/uniprot/Q9P7L5 Q9P7L5]
−
{{#set: ec-number=ec-4.6.1.16}}
+
** [http://www.uniprot.org/uniprot/P07991 P07991]
−
{{#set: nb gene associated=2}}
+
** [http://www.uniprot.org/uniprot/P04181 P04181]
−
{{#set: nb pathway associated=2}}
+
** [http://www.uniprot.org/uniprot/P29758 P29758]
−
{{#set: reconstruction category=annotation}}
+
** [http://www.uniprot.org/uniprot/P04182 P04182]
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: direction=reversible}}
 +
{{#set: common-name=ornithine aminotransferase}}
 +
{{#set: ec-number=ec-2.6.1.13}}
 +
{{#set: nb gene associated=1}}
 +
{{#set: nb pathway associated=0}}
 +
{{#set: reconstruction category=annotation|orthology}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Revision as of 09:29, 27 August 2019

Reaction ORNITHINE--OXO-ACID-AMINOTRANSFERASE-RXN

  • direction:
    • reversible
  • common-name:
    • ornithine aminotransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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