Difference between revisions of "TRNA-Containing-N7-Methylguanine-46"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.14.11.1-RXN 1.14.11.1-RXN] == * direction: ** left-to-right * common-name: ** γ-butyrobetai...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UGDC UGDC] == * direction: ** left-to-right * common-name: ** udp-glucuronate decarboxylase == Reac...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.14.11.1-RXN 1.14.11.1-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UGDC UGDC] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** γ-butyrobetaine dioxygenase
+
** udp-glucuronate decarboxylase
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/1.14.11.1 ec-1.14.11.1]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[GAMMA-BUTYROBETAINE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CARNITINE]][c] '''+''' 1 [[SUC]][c]
+
* 1.0 [[PROTON]][c] '''+''' 1.0 [[UDP-GLUCURONATE]][c] '''=>''' 1.0 [[CARBON-DIOXIDE]][c] '''+''' 1.0 [[UDP-D-XYLOSE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ01929]]
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* Gene: [[SJ00231]]
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** Category: [[annotation]]
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** Category: [[orthology]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ11793]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ01883]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6100]], L-carnitine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6100 PWY-6100]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-3621]], γ-butyrobetaine degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3621 PWY-3621]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24029 24029]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R02397 R02397]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=γ-butyrobetaine dioxygenase}}
+
{{#set: common-name=udp-glucuronate decarboxylase}}
−
{{#set: ec-number=ec-1.14.11.1}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb gene associated=3}}
+
{{#set: nb pathway associated=0}}
−
{{#set: nb pathway associated=2}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Revision as of 09:29, 27 August 2019

Reaction UGDC

  • direction:
    • left-to-right
  • common-name:
    • udp-glucuronate decarboxylase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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