Difference between revisions of "CPD-371"
Jump to navigation
Jump to search
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7664 RXN-7664] == * direction: ** left-to-right * common-name: ** geranylgeranyl-chlorophyll a...") |
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHIONYL-TRNA-FORMYLTRANSFERASE-RXN METHIONYL-TRNA-FORMYLTRANSFERASE-RXN] == * direction: ** left-...") |
||
Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN- | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHIONYL-TRNA-FORMYLTRANSFERASE-RXN METHIONYL-TRNA-FORMYLTRANSFERASE-RXN] == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
− | ** | + | ** 10-formyltetrahydrofolate:l-methionyl-trnafmet n-formyltransferase |
+ | * ec-number: | ||
+ | ** [http://enzyme.expasy.org/EC/2.1.2.9 ec-2.1.2.9] | ||
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[FORMYL-THF-GLU-N]][c] '''+''' 1 [[L-methionyl-tRNAfmet]][c] '''=>''' 1 [[N-formyl-L-methionyl-tRNAfmet]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[THF-GLU-N]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[SJ18164]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
Line 14: | Line 16: | ||
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
− | |||
− | |||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24381 24381] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R03940 R03940] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P94463 P94463] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PJ28 Q9PJ28] | ||
+ | ** [http://www.uniprot.org/uniprot/P50932 P50932] | ||
+ | ** [http://www.uniprot.org/uniprot/P47605 P47605] | ||
+ | ** [http://www.uniprot.org/uniprot/P44787 P44787] | ||
+ | ** [http://www.uniprot.org/uniprot/P56461 P56461] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9CEE9 Q9CEE9] | ||
+ | ** [http://www.uniprot.org/uniprot/O51091 O51091] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JWY9 Q9JWY9] | ||
+ | ** [http://www.uniprot.org/uniprot/P23882 P23882] | ||
+ | ** [http://www.uniprot.org/uniprot/P32785 P32785] | ||
+ | ** [http://www.uniprot.org/uniprot/P75235 P75235] | ||
+ | ** [http://www.uniprot.org/uniprot/Q55163 Q55163] | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: common-name= | + | {{#set: common-name=10-formyltetrahydrofolate:l-methionyl-trnafmet n-formyltransferase}} |
+ | {{#set: ec-number=ec-2.1.2.9}} | ||
{{#set: nb gene associated=1}} | {{#set: nb gene associated=1}} | ||
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=0}} |
− | {{#set: reconstruction category=orthology | + | {{#set: reconstruction category=annotation|orthology}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=saccharina_japonica_genome | + | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}} |
Revision as of 09:29, 27 August 2019
Contents
Reaction METHIONYL-TRNA-FORMYLTRANSFERASE-RXN
- direction:
- left-to-right
- common-name:
- 10-formyltetrahydrofolate:l-methionyl-trnafmet n-formyltransferase
- ec-number:
Reaction formula
- 1 FORMYL-THF-GLU-N[c] + 1 L-methionyl-tRNAfmet[c] => 1 N-formyl-L-methionyl-tRNAfmet[c] + 1 PROTON[c] + 1 THF-GLU-N[c]
Gene(s) associated with this reaction
- Gene: SJ18164
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links
- RHEA:
- LIGAND-RXN:
- UNIPROT: