Difference between revisions of "RXN-3701"
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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14264 RXN-14264] == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/1.3...") |
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.8.2.29-RXN 2.8.2.29-RXN] == * direction: ** left-to-right * common-name: ** [heparan sulfate]-glu...") |
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN- | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.8.2.29-RXN 2.8.2.29-RXN] == |
* direction: | * direction: | ||
− | ** | + | ** left-to-right |
+ | * common-name: | ||
+ | ** [heparan sulfate]-glucosamine 3-o-sulfotransferase | ||
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/2.8.2.29 ec-2.8.2.29] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[Heparan-sulfate-D-GlcNS]][c] '''+''' 1 [[PAPS]][c] '''=>''' 1 [[3-5-ADP]][c] '''+''' 1 [[Heparan-sulfate-3-N-disulfate]][c] '''+''' 1 [[PROTON]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[SJ20108]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
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== Pathway(s) == | == Pathway(s) == | ||
+ | * [[PWY-6558]], heparan sulfate biosynthesis (late stages): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6558 PWY-6558] | ||
+ | ** '''7''' reactions found over '''13''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
− | |||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | |||
== External links == | == External links == | ||
− | {{#set: direction= | + | * RHEA: |
− | {{#set: ec-number=ec- | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15462 15462] |
− | {{#set: nb gene associated= | + | {{#set: direction=left-to-right}} |
− | {{#set: nb pathway associated= | + | {{#set: common-name=[heparan sulfate]-glucosamine 3-o-sulfotransferase}} |
− | {{#set: reconstruction category= | + | {{#set: ec-number=ec-2.8.2.29}} |
− | {{#set: reconstruction tool= | + | {{#set: nb gene associated=1}} |
+ | {{#set: nb pathway associated=1}} | ||
+ | {{#set: reconstruction category=annotation}} | ||
+ | {{#set: reconstruction tool=pathwaytools}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=saccharina_japonica_genome | + | {{#set: reconstruction source=saccharina_japonica_genome}} |
Revision as of 09:30, 27 August 2019
Contents
Reaction 2.8.2.29-RXN
- direction:
- left-to-right
- common-name:
- [heparan sulfate]-glucosamine 3-o-sulfotransferase
- ec-number:
Reaction formula
- 1 Heparan-sulfate-D-GlcNS[c] + 1 PAPS[c] => 1 3-5-ADP[c] + 1 Heparan-sulfate-3-N-disulfate[c] + 1 PROTON[c]
Gene(s) associated with this reaction
- Gene: SJ20108
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-6558, heparan sulfate biosynthesis (late stages): PWY-6558
- 7 reactions found over 13 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
- RHEA:
Property "Common-name" (as page type) with input value "heparan sulfate]-glucosamine 3-o-sulfotransferase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.