Difference between revisions of "RXN-13443"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10706 RXN-10706] == * direction: ** left-to-right * common-name: ** acyl-coa oxidase ** fatty-a...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17890 RXN-17890] == * direction: ** left-to-right * common-name: ** arginyl-trna--protein trans...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10706 RXN-10706] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17890 RXN-17890] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** acyl-coa oxidase
+
** arginyl-trna--protein transferase
** fatty-acyl coenzyme a oxidase
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/1.3.3.6 ec-1.3.3.6]
+
** [http://enzyme.expasy.org/EC/2.3.2.8 ec-2.3.2.8]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD-11521]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-11522]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
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* 1 [[Charged-ARG-tRNAs]][c] '''+''' 1 [[N-terminal-L-cysteine-sulfinate]][c] '''=>''' 1 [[ARG-tRNAs]][c] '''+''' 1 [[L-arginyl-3-sulfino-L-alaninyl-Peptides]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ07451]]
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* Gene: [[SJ03517]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ07452]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ03090]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ13468]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ19669]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-735]], jasmonic acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-735 PWY-735]
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* [[PWY-7799]], Arg/N-end rule pathway (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7799 PWY-7799]
** '''16''' reactions found over '''19''' reactions in the full pathway
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** '''7''' reactions found over '''14''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=fatty-acyl coenzyme a oxidase|acyl-coa oxidase}}
+
{{#set: common-name=arginyl-trna--protein transferase}}
{{#set: ec-number=ec-1.3.3.6}}
+
{{#set: ec-number=ec-2.3.2.8}}
{{#set: nb gene associated=5}}
+
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=annotation}}
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 09:31, 27 August 2019

Reaction RXN-17890

  • direction:
    • left-to-right
  • common-name:
    • arginyl-trna--protein transferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7799, Arg/N-end rule pathway (eukaryotic): PWY-7799
    • 7 reactions found over 14 reactions in the full pathway

Reconstruction information

External links