Difference between revisions of "SJ02350"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-14705 CPD-14705] == * common-name: ** 4-hydroxy-2-nonenal-[cys-gly] conjugate * smiles: **...")
(Created page with "Category:gene == Gene SJ14175 == * transcription-direction: ** positive * right-end-position: ** 564341 * left-end-position: ** 552588 * centisome-position: ** 76.91295...")
Line 1: Line 1:
−
[[Category:metabolite]]
+
[[Category:gene]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-14705 CPD-14705] ==
+
== Gene SJ14175 ==
−
* common-name:
+
* transcription-direction:
−
** 4-hydroxy-2-nonenal-[cys-gly] conjugate
+
** positive
−
* smiles:
+
* right-end-position:
−
** cccccc(o)c(c[ch]=o)scc([n+])c(=o)ncc([o-])=o
+
** 564341
−
* inchi-key:
+
* left-end-position:
−
** lqtwzqsulmrbee-uhfffaoysa-n
+
** 552588
−
* molecular-weight:
+
* centisome-position:
−
** 334.43
+
** 76.91295   
−
== Reaction(s) known to consume the compound ==
+
== Organism(s) associated with this gene  ==
−
* [[RXN-13677]]
+
* [[S.japonica_sterols_curated]]
−
== Reaction(s) known to produce the compound ==
+
== Reaction(s) associated ==
−
* [[RXN-13675]]
+
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
−
== Reaction(s) of unknown directionality ==
+
** Category: [[annotation]]
−
{{#set: common-name=4-hydroxy-2-nonenal-[cys-gly] conjugate}}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: inchi-key=inchikey=lqtwzqsulmrbee-uhfffaoysa-n}}
+
* [[F16BDEPHOS-RXN]]
−
{{#set: molecular-weight=334.43}}
+
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[SUGAR-PHOSPHATASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
== Pathway(s) associated ==
 +
* [[P185-PWY]]
 +
** '''11''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY66-399]]
 +
** '''11''' reactions found over '''12''' reactions in the full pathway
 +
* [[SUCSYN-PWY]]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[CALVIN-PWY]]
 +
** '''12''' reactions found over '''13''' reactions in the full pathway
 +
* [[GLUCONEO-PWY]]
 +
** '''12''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-5484]]
 +
** '''10''' reactions found over '''11''' reactions in the full pathway
 +
* [[GLYCOLYSIS]]
 +
** '''11''' reactions found over '''12''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=564341}}
 +
{{#set: left-end-position=552588}}
 +
{{#set: centisome-position=76.91295    }}
 +
{{#set: organism associated=S.japonica_sterols_curated}}
 +
{{#set: nb reaction associated=3}}
 +
{{#set: nb pathway associated=7}}

Revision as of 20:19, 18 December 2020

Gene SJ14175

  • transcription-direction:
    • positive
  • right-end-position:
    • 564341
  • left-end-position:
    • 552588
  • centisome-position:
    • 76.91295

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • P185-PWY
    • 11 reactions found over 12 reactions in the full pathway
  • PWY66-399
    • 11 reactions found over 12 reactions in the full pathway
  • SUCSYN-PWY
    • 6 reactions found over 7 reactions in the full pathway
  • CALVIN-PWY
    • 12 reactions found over 13 reactions in the full pathway
  • GLUCONEO-PWY
    • 12 reactions found over 13 reactions in the full pathway
  • PWY-5484
    • 10 reactions found over 11 reactions in the full pathway
  • GLYCOLYSIS
    • 11 reactions found over 12 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ02350&oldid=40577"