Difference between revisions of "SJ13651"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GLY GLY] == * common-name: ** glycine * smiles: ** c([n+])c([o-])=o * inchi-key: ** dhmqdgoqfoq...")
(Created page with "Category:gene == Gene SJ07452 == * transcription-direction: ** negative * right-end-position: ** 199052 * left-end-position: ** 193487 * centisome-position: ** 42.490158...")
Line 1: Line 1:
−
[[Category:metabolite]]
+
[[Category:gene]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GLY GLY] ==
+
== Gene SJ07452 ==
−
* common-name:
+
* transcription-direction:
−
** glycine
+
** negative
−
* smiles:
+
* right-end-position:
−
** c([n+])c([o-])=o
+
** 199052
−
* inchi-key:
+
* left-end-position:
−
** dhmqdgoqfoqnfh-uhfffaoysa-n
+
** 193487
−
* molecular-weight:
+
* centisome-position:
−
** 75.067
+
** 42.490158   
−
== Reaction(s) known to consume the compound ==
+
== Organism(s) associated with this gene  ==
−
* [[1.4.3.19-RXN]]
+
* [[S.japonica_sterols_curated]]
−
* [[ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN]]
+
== Reaction(s) associated ==
−
* [[GCVP-RXN]]
 
−
* [[GLUTATHIONE-SYN-RXN]]
 
−
* [[GLYCINE--TRNA-LIGASE-RXN]]
 
−
* [[GLYCINE-AMINOTRANSFERASE-RXN]]
 
−
* [[GLYCINE-N-METHYLTRANSFERASE-RXN]]
 
−
* [[GLYOHMETRANS-RXN]]
 
−
* [[GLYRIBONUCSYN-RXN]]
 
−
* [[RXN-10821]]
 
−
* [[RXN-12614]]
 
−
* [[RXN-13404]]
 
−
* [[RXN-13406]]
 
−
* [[biomass_rxn]]
 
−
== Reaction(s) known to produce the compound ==
 
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[2.3.2.15-RXN]]
+
* [[1.17.99.3-RXN]]
−
* [[AKBLIG-RXN]]
+
** Category: [[annotation]]
−
* [[ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN]]
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[GCVP-RXN]]
+
* [[ACYLCOADEHYDROG-RXN]]
−
* [[GLYCINE-AMINOTRANSFERASE-RXN]]
+
** Category: [[annotation]]
−
* [[GLYOHMETRANS-RXN]]
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[LTAA-RXN]]
+
* [[LONG-CHAIN-FATTY-ACYL-COA-REDUCTASE-RXN]]
−
* [[RXN-13677]]
+
** Category: [[annotation]]
−
* [[RXN-6622]]
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-6642]]
+
* [[RXN-10696]]
−
* [[RXN-9896]]
+
** Category: [[annotation]]
−
* [[RXN0-5234]]
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN0-6974]]
+
* [[RXN-10706]]
−
* [[RXN0-6977]]
+
** Category: [[annotation]]
−
* [[RXN0-6982]]
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN0-6983]]
+
* [[RXN-10707]]
−
* [[RXN0-6984]]
+
** Category: [[annotation]]
−
* [[RXN0-6987]]
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN0-6988]]
+
* [[RXN-11026]]
−
* [[THREONINE-ALDOLASE-RXN]]
+
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12518]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12669]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-14576]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-14771]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-14775]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-14785]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-14789]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-14796]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-16134]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17113]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
</div>
 
</div>
−
== Reaction(s) of unknown directionality ==
+
== Pathway(s) associated ==
−
{{#set: common-name=glycine}}
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
{{#set: inchi-key=inchikey=dhmqdgoqfoqnfh-uhfffaoysa-n}}
+
* [[FAO-PWY]]
−
{{#set: molecular-weight=75.067}}
+
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-735]]
 +
** '''16''' reactions found over '''19''' reactions in the full pathway
 +
* [[PWY-7007]]
 +
** '''4''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7288]]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5136]]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY66-391]]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6837]]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6920]]
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7291]]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7337]]
 +
** '''6''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-7338]]
 +
** '''6''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-7340]]
 +
** '''5''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-7606]]
 +
** '''8''' reactions found over '''14''' reactions in the full pathway
 +
* [[PWY-7726]]
 +
** '''8''' reactions found over '''13''' reactions in the full pathway
 +
</div>
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=199052}}
 +
{{#set: left-end-position=193487}}
 +
{{#set: centisome-position=42.490158    }}
 +
{{#set: organism associated=S.japonica_sterols_curated}}
 +
{{#set: nb reaction associated=17}}
 +
{{#set: nb pathway associated=14}}

Revision as of 20:19, 18 December 2020

Gene SJ07452

  • transcription-direction:
    • negative
  • right-end-position:
    • 199052
  • left-end-position:
    • 193487
  • centisome-position:
    • 42.490158

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • FAO-PWY
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-735
    • 16 reactions found over 19 reactions in the full pathway
  • PWY-7007
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-7288
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-5136
    • 5 reactions found over 5 reactions in the full pathway
  • PWY66-391
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-6837
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-6920
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-7291
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-7337
    • 6 reactions found over 12 reactions in the full pathway
  • PWY-7338
    • 6 reactions found over 12 reactions in the full pathway
  • PWY-7340
    • 5 reactions found over 10 reactions in the full pathway
  • PWY-7606
    • 8 reactions found over 14 reactions in the full pathway
  • PWY-7726
    • 8 reactions found over 13 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ13651&oldid=40747"