Difference between revisions of "SJ09127"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-3187 CPD-3187] == * common-name: ** 2'-hydroxynicotine * smiles: ** c1(ccc(o)([n+](c)1)c2(=...")
(Created page with "Category:gene == Gene SJ04429 == * transcription-direction: ** negative * right-end-position: ** 12784 * left-end-position: ** 3890 * centisome-position: ** 0.76147 ==...")
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-3187 CPD-3187] ==
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== Gene SJ04429 ==
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* common-name:
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* transcription-direction:
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** 2'-hydroxynicotine
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** negative
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* smiles:
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* right-end-position:
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** c1(ccc(o)([n+](c)1)c2(=cn=cc=c2))
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** 12784
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* inchi-key:
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* left-end-position:
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** boqrppfuushfgw-snvbaglbsa-o
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** 3890
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* molecular-weight:
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* centisome-position:
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** 179.241
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** 0.76147   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to produce the compound ==
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* [[S.japonica_sterols_curated]]
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* [[RXN66-146]]
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== Reaction(s) associated ==
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== Reaction(s) of unknown directionality ==
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* [[ATPASE-RXN]]
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{{#set: common-name=2'-hydroxynicotine}}
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** Category: [[annotation]]
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{{#set: inchi-key=inchikey=boqrppfuushfgw-snvbaglbsa-o}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: molecular-weight=179.241}}
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12195]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12196]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN0-5462]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-6545]]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7210]]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7198]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7184]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=12784}}
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{{#set: left-end-position=3890}}
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{{#set: centisome-position=0.76147    }}
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{{#set: organism associated=S.japonica_sterols_curated}}
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{{#set: nb reaction associated=5}}
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{{#set: nb pathway associated=4}}

Revision as of 20:20, 18 December 2020

Gene SJ04429

  • transcription-direction:
    • negative
  • right-end-position:
    • 12784
  • left-end-position:
    • 3890
  • centisome-position:
    • 0.76147

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ09127&oldid=40896"