Difference between revisions of "SJ00022"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD1G-768 CPD1G-768] == * common-name: ** 6-o-α-mycolyl-trehalose 6-phosphate * smiles: *...")
(Created page with "Category:gene == Gene SJ10493 == * transcription-direction: ** positive * right-end-position: ** 324933 * left-end-position: ** 321173 * centisome-position: ** 82.587746...")
Line 1: Line 1:
−
[[Category:metabolite]]
+
[[Category:gene]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD1G-768 CPD1G-768] ==
+
== Gene SJ10493 ==
−
* common-name:
+
* transcription-direction:
−
** 6-o-α-mycolyl-trehalose 6-phosphate
+
** positive
−
* smiles:
+
* right-end-position:
−
** ccccccccccccccccccccccccccc(c(o)cccccccccccccccc2(cc(ccccccccccc1(cc(cccccccccccccccccc)1))2))c(=o)occ3(oc(c(c(c3o)o)o)oc4(c(c(c(c(o4)cop([o-])(=o)[o-])o)o)o))
+
** 324933
−
* inchi-key:
+
* left-end-position:
−
** gxobndajnvberi-bgzciimlsa-l
+
** 321173
−
* molecular-weight:
+
* centisome-position:
−
** 1540.305
+
** 82.587746   
−
== Reaction(s) known to consume the compound ==
+
== Organism(s) associated with this gene  ==
−
* [[RXN1G-1435]]
+
* [[S.japonica_sterols_curated]]
−
== Reaction(s) known to produce the compound ==
+
== Reaction(s) associated ==
−
== Reaction(s) of unknown directionality ==
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
{{#set: common-name=6-o-&alpha;-mycolyl-trehalose 6-phosphate}}
+
* [[2.5.1.19-RXN]]
−
{{#set: inchi-key=inchikey=gxobndajnvberi-bgzciimlsa-l}}
+
** Category: [[annotation]]
−
{{#set: molecular-weight=1540.305}}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[3-DEHYDROQUINATE-DEHYDRATASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[3-DEHYDROQUINATE-SYNTHASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-7967]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-7968]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[SHIKIMATE-5-DEHYDROGENASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[SHIKIMATE-KINASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 +
== Pathway(s) associated ==
 +
* [[PWY-6163]]
 +
** '''6''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6707]]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[QUINATEDEG-PWY]]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6416]]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6164]]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=324933}}
 +
{{#set: left-end-position=321173}}
 +
{{#set: centisome-position=82.587746    }}
 +
{{#set: organism associated=S.japonica_sterols_curated}}
 +
{{#set: nb reaction associated=7}}
 +
{{#set: nb pathway associated=5}}

Revision as of 20:20, 18 December 2020

Gene SJ10493

  • transcription-direction:
    • positive
  • right-end-position:
    • 324933
  • left-end-position:
    • 321173
  • centisome-position:
    • 82.587746

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6163
    • 6 reactions found over 5 reactions in the full pathway
  • PWY-6707
    • 1 reactions found over 3 reactions in the full pathway
  • QUINATEDEG-PWY
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6416
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6164
    • 2 reactions found over 2 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ00022&oldid=41303"