Difference between revisions of "SJ06911"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD0-2123 CPD0-2123] == * common-name: ** 3-oxodecanoyl-coa * smiles: ** cccccccc(=o)cc(=o)sccn...")
(Created page with "Category:gene == Gene SJ03775 == * transcription-direction: ** positive * right-end-position: ** 42217 * left-end-position: ** 29473 * centisome-position: ** 25.280703...")
Line 1: Line 1:
−
[[Category:metabolite]]
+
[[Category:gene]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD0-2123 CPD0-2123] ==
+
== Gene SJ03775 ==
−
* common-name:
+
* transcription-direction:
−
** 3-oxodecanoyl-coa
+
** positive
−
* smiles:
+
* right-end-position:
−
** cccccccc(=o)cc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-]
+
** 42217
−
* inchi-key:
+
* left-end-position:
−
** azcvxmaplhsiky-hsjnekgzsa-j
+
** 29473
−
* molecular-weight:
+
* centisome-position:
−
** 931.738
+
** 25.280703   
−
== Reaction(s) known to consume the compound ==
+
== Organism(s) associated with this gene  ==
−
* [[ACACT4]]
+
* [[S.japonica_sterols_curated]]
−
* [[HACD4h]]
+
== Reaction(s) associated ==
−
* [[RXN-13617]]
+
* [[3.6.3.8-RXN]]
−
== Reaction(s) known to produce the compound ==
+
** Category: [[annotation]]
−
* [[ACACT4]]
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[ACACT4h]]
+
* [[ATPASE-RXN]]
−
* [[HACD4h]]
+
** Category: [[annotation]]
−
* [[RXN-12490]]
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
== Reaction(s) of unknown directionality ==
+
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
−
{{#set: common-name=3-oxodecanoyl-coa}}
+
** Category: [[annotation]]
−
{{#set: inchi-key=inchikey=azcvxmaplhsiky-hsjnekgzsa-j}}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: molecular-weight=931.738}}
+
* [[RXN-12195]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12196]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-5462]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
== Pathway(s) associated ==
 +
* [[PWY-6545]]
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7210]]
 +
** '''8''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7198]]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7184]]
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=42217}}
 +
{{#set: left-end-position=29473}}
 +
{{#set: centisome-position=25.280703    }}
 +
{{#set: organism associated=S.japonica_sterols_curated}}
 +
{{#set: nb reaction associated=6}}
 +
{{#set: nb pathway associated=4}}

Revision as of 20:20, 18 December 2020

Gene SJ03775

  • transcription-direction:
    • positive
  • right-end-position:
    • 42217
  • left-end-position:
    • 29473
  • centisome-position:
    • 25.280703

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ06911&oldid=41326"