Difference between revisions of "SJ16959"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-13377 CPD-13377] == * common-name: ** xlxg xyloglucan oligosaccharide * smiles: ** c8(c(c(c...")
(Created page with "Category:gene == Gene SJ04425 == * transcription-direction: ** negative * right-end-position: ** 89478 * left-end-position: ** 88202 * centisome-position: ** 82.362495...")
Line 1: Line 1:
−
[[Category:metabolite]]
+
[[Category:gene]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-13377 CPD-13377] ==
+
== Gene SJ04425 ==
−
* common-name:
+
* transcription-direction:
−
** xlxg xyloglucan oligosaccharide
+
** negative
−
* smiles:
+
* right-end-position:
−
** c8(c(c(c(c(occ7(oc(oc3(c(o)c(o)c(oc(coc1(c(c(c(co1)o)o)oc2(c(c(c(c(o2)co)o)o)o)))3)oc5(c(o)c(o)c(oc(coc4(c(c(c(co4)o)o)o))5)oc6(c(o)c(o)c(o)oc(co)6))))c(o)c(o)c(o)7))o8)o)o)o)
+
** 89478
−
* inchi-key:
+
* left-end-position:
−
** kbczexdvbxuvgr-ikgyadnmsa-n
+
** 88202
−
* molecular-weight:
+
* centisome-position:
−
** 1225.073
+
** 82.362495   
−
== Reaction(s) known to consume the compound ==
+
== Organism(s) associated with this gene  ==
−
* [[RXN-12399]]
+
* [[S.japonica_sterols_curated]]
−
== Reaction(s) known to produce the compound ==
+
== Reaction(s) associated ==
−
== Reaction(s) of unknown directionality ==
+
* [[ATPASE-RXN]]
−
{{#set: common-name=xlxg xyloglucan oligosaccharide}}
+
** Category: [[annotation]]
−
{{#set: inchi-key=inchikey=kbczexdvbxuvgr-ikgyadnmsa-n}}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: molecular-weight=1225.073}}
+
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12195]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12196]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-5462]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
== Pathway(s) associated ==
 +
* [[PWY-6545]]
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7210]]
 +
** '''8''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7198]]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7184]]
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=89478}}
 +
{{#set: left-end-position=88202}}
 +
{{#set: centisome-position=82.362495    }}
 +
{{#set: organism associated=S.japonica_sterols_curated}}
 +
{{#set: nb reaction associated=5}}
 +
{{#set: nb pathway associated=4}}

Revision as of 20:21, 18 December 2020

Gene SJ04425

  • transcription-direction:
    • negative
  • right-end-position:
    • 89478
  • left-end-position:
    • 88202
  • centisome-position:
    • 82.362495

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ16959&oldid=41416"