Difference between revisions of "SJ10320"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=5-HYDROXY-FERULIC-ACID 5-HYDROXY-FERULIC-ACID] == * common-name: ** 5-hydroxyferulate * smiles:...")
(Created page with "Category:gene == Gene SJ11538 == * transcription-direction: ** negative * right-end-position: ** 101933 * left-end-position: ** 96943 * centisome-position: ** 26.12547...")
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=5-HYDROXY-FERULIC-ACID 5-HYDROXY-FERULIC-ACID] ==
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== Gene SJ11538 ==
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* common-name:
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* transcription-direction:
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** 5-hydroxyferulate
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** negative
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* smiles:
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* right-end-position:
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** coc1(c=c(c=cc([o-])=o)c=c(o)c(o)=1)
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** 101933
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* inchi-key:
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* left-end-position:
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** yfxwtvldsksylw-nscuhmnnsa-m
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** 96943
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* molecular-weight:
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* centisome-position:
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** 209.178
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** 26.12547   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[RXN-3422]]
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* [[S.japonica_sterols_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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* [[RXN-1121]]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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== Reaction(s) of unknown directionality ==
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* [[3.1.1.64-RXN]]
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{{#set: common-name=5-hydroxyferulate}}
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** Category: [[orthology]]
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{{#set: inchi-key=inchikey=yfxwtvldsksylw-nscuhmnnsa-m}}
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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{{#set: molecular-weight=209.178}}
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* [[3.6.3.37-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[ATPASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[CARBOXYLESTERASE-RXN]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RETINYL-PALMITATE-ESTERASE-RXN]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-10711]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-10767]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-12195]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12196]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12252]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-12575]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN0-5462]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXNQT-4366]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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</div>
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== Pathway(s) associated ==
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* [[PWY-6303]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-6545]]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7210]]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7198]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7184]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-6857]]
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** '''3''' reactions found over '''7''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=101933}}
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{{#set: left-end-position=96943}}
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{{#set: centisome-position=26.12547    }}
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{{#set: organism associated=S.japonica_sterols_curated}}
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{{#set: nb reaction associated=14}}
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{{#set: nb pathway associated=6}}

Revision as of 20:21, 18 December 2020

Gene SJ11538

  • transcription-direction:
    • negative
  • right-end-position:
    • 101933
  • left-end-position:
    • 96943
  • centisome-position:
    • 26.12547

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6303
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-6857
    • 3 reactions found over 7 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ10320&oldid=41762"