Difference between revisions of "SJ07844"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-13611 CPD-13611] == * common-name: ** sphinganine (c20) * smiles: ** cccccccccccccccccc(o)c...")
(Created page with "Category:gene == Gene SJ12507 == * transcription-direction: ** negative * right-end-position: ** 97352 * left-end-position: ** 81909 * centisome-position: ** 10.928778...")
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[[Category:metabolite]]
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[[Category:gene]]
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-13611 CPD-13611] ==
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== Gene SJ12507 ==
* common-name:
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* transcription-direction:
** sphinganine (c20)
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** negative
* smiles:
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* right-end-position:
** cccccccccccccccccc(o)c([n+])co
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** 97352
* inchi-key:
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* left-end-position:
** ufmhybvqzspwss-vqtjnvassa-o
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** 81909
* molecular-weight:
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* centisome-position:
** 330.573
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** 10.928778   
== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
* [[RXN-12642]]
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* [[S.japonica_sterols_curated]]
== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
* [[RXN-12642]]
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* [[ATPASE-RXN]]
== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
{{#set: common-name=sphinganine (c20)}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
{{#set: inchi-key=inchikey=ufmhybvqzspwss-vqtjnvassa-o}}
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
{{#set: molecular-weight=330.573}}
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12195]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12196]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN0-5462]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
== Pathway(s) associated ==
 +
* [[PWY-6545]]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7210]]
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** '''8''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7198]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7184]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=97352}}
 +
{{#set: left-end-position=81909}}
 +
{{#set: centisome-position=10.928778    }}
 +
{{#set: organism associated=S.japonica_sterols_curated}}
 +
{{#set: nb reaction associated=5}}
 +
{{#set: nb pathway associated=4}}

Revision as of 20:22, 18 December 2020

Gene SJ12507

  • transcription-direction:
    • negative
  • right-end-position:
    • 97352
  • left-end-position:
    • 81909
  • centisome-position:
    • 10.928778

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway