Difference between revisions of "SJ22546"

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(Created page with "Category:gene == Gene SJ04004 == * transcription-direction: ** negative * right-end-position: ** 388870 * left-end-position: ** 359555 * centisome-position: ** 69.34322...")
(Created page with "Category:gene == Gene SJ07712 == * transcription-direction: ** positive * right-end-position: ** 270641 * left-end-position: ** 255653 * centisome-position: ** 28.889662...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ04004 ==
+
== Gene SJ07712 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 388870
+
** 270641
 
* left-end-position:
 
* left-end-position:
−
** 359555
+
** 255653
 
* centisome-position:
 
* centisome-position:
−
** 69.34322    
+
** 28.889662    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_carotenoid_curated]]
+
* [[S.japonica_sterols_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[PEPCARBOX-RXN]]
+
* [[3.1.26.5-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-6480]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[PPC]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY0-1479]]
−
* [[PWY-7124]]
+
** '''4''' reactions found over '''10''' reactions in the full pathway
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
{{#set: transcription-direction=positive}}
−
* [[PWY-6549]]
+
{{#set: right-end-position=270641}}
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
{{#set: left-end-position=255653}}
−
* [[PWY-1622]]
+
{{#set: centisome-position=28.889662   }}
−
** '''6''' reactions found over '''13''' reactions in the full pathway
+
{{#set: organism associated=S.japonica_sterols_curated}}
−
* [[PWY-7117]]
 
−
** '''10''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-7115]]
 
−
** '''9''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-241]]
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-5913]]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-6142]]
 
−
** '''10''' reactions found over '''13''' reactions in the full pathway
 
−
* [[P23-PWY]]
 
−
** '''9''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWYQT-4429]]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-6146]]
 
−
** '''9''' reactions found over '''2''' reactions in the full pathway
 
−
* [[FERMENTATION-PWY]]
 
−
** '''11''' reactions found over '''16''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=388870}}
 
−
{{#set: left-end-position=359555}}
 
−
{{#set: centisome-position=69.34322   }}
 
−
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
 
{{#set: nb reaction associated=2}}
 
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=12}}
+
{{#set: nb pathway associated=1}}

Revision as of 20:23, 18 December 2020

Gene SJ07712

  • transcription-direction:
    • positive
  • right-end-position:
    • 270641
  • left-end-position:
    • 255653
  • centisome-position:
    • 28.889662

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY0-1479
    • 4 reactions found over 10 reactions in the full pathway




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